RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KIF7Q2M1P5 1343 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 RNF123Q5XPI4 1314 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 DISP3Q9P2K9 1392 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CLRN2A0PK11 232 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CLEC18AA5D8T8 446 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 SERINC4A6NH21 518 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 A8MUI8 341 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CCSO14618 274 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 SIGLEC5O15389 551 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ADAM12O43184 909 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 KIAA0513O60268 411 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CSO75390 466 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 LRCH4O75427 683 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MTX2O75431 263 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 PRAMEF12O95522 483 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 EML2O95834 649 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 TXNDC12O95881 172 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 KRT6BP04259 564 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 RPLP0P05388 317 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 GSTA1P08263 222 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 THRBP10828 461 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 PDHBP11177 359 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CEACAM1P13688 526 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 GPX3P22352 226 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 HNRNPA2B1P22626 353 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 OR1D2P34982 312 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MAP2K2P36507 400 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 DLSTP36957 453 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 FEN1P39748 380 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MATKP42679 507 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 OR3A2P47893 321 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 KRT6CP48668 564 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 NAPAP54920 295 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 XGP55808 180 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 LINC00205P59089 165 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 HSPA14Q0VDF9 509 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 RFTN1Q14699 578 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 P2RY6Q15077 328 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CLPPQ16740 277 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CCDC142Q17RM4 750 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CCDC57Q2TAC2 916 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MAJINQ3KP22 176 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 RFTN2Q52LD8 501 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF585BQ52M93 769 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 LRRC23Q53EV4 343 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CFAP157Q5JU67 520 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ATAD3BQ5T9A4 648 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ARHGAP17Q68EM7 881 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CAPRIN2Q6IMN6 1127 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 BLOC1S2Q6QNY1 142 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF730Q6ZMV8 503 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 Q6ZRG5 221 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 C9orf139Q6ZV77 190 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ASRGL1Q7L266 308 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ZER1Q7Z7L7 766 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM110Q86TL2 294 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 TRPT1Q86TN4 253 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 RBM23Q86U06 439 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 YRDCQ86U90 279 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 LACC1Q8IV20 430 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 UNC5CLQ8IV45 518 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 BCORP1Q8N888 145 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CNBD1Q8NA66 436 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 COLGALT1Q8NBJ5 622 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CLEC18CQ8NCF0 446 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ICA1LQ8NDH6 482 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 OR4D10Q8NGI6 311 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 OR6S1Q8NH40 331 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 OR1L3Q8NH93 324 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 RPLP0P6Q8NHW5 317 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 DQX1Q8TE96 717 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 SMAP2Q8WU79 429 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 FCAMRQ8WWV6 532 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM37Q8WXS4 190 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 DYRK2Q92630 601 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MRPL24Q96A35 216 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 PINX1Q96BK5 328 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 OMA1Q96E52 524 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 GIMAP5Q96F15 307 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 COG3Q96JB2 828 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 LMLNQ96KR4 655 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 C2orf48Q96LS8 159 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MEIS3Q99687 375 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 PIGQQ9BRB3 760 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 CCM2Q9BSQ5 444 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 NUSAP1Q9BXS6 441 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 PITPNM3Q9BZ71 974 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 TRIM6Q9C030 488 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM117Q9H0C3 514 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 DDX31Q9H8H2 851 aaKnown RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 SLC52A3Q9NQ40 469 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 MIS18AQ9NYP9 233 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ATXN10Q9UBB4 475 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ATP6V1HQ9UI12 483 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF490Q9ULM2 529 aaPredicted RBP2.04□□□□□ -2.08
GABPB1-209ENST00000559100 FKBP7Q9Y680 259 aa2.04□□□□□ -2.08
GABPB1-209ENST00000559100 ATAD2BQ9ULI0 1458 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NCAPD2Q15021 1401 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms