RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 TSG101Q99816 390 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 SOX7Q9BT81 388 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 XPO4Q9C0E2 1151 aaKnown RBP5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 NELFAQ9H3P2 528 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 MANSC1Q9H8J5 431 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 LIN28AQ9H9Z2 209 aaKnown RBP5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 IL1RL2Q9HB29 575 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 MSL2Q9HCI7 577 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 LANCL2Q9NS86 450 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 PARPBPQ9NWS1 579 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 KCNS2Q9ULS6 477 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 LIPT1Q9Y234 373 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 PCDHA3Q9Y5H8 950 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 KLK4Q9Y5K2 254 aa5.73□□□□□ -1.49
AC090888.3-201ENST00000558917 GLYATL1P3A0A0U1RQE8 302 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 PRAMEF25A6NGN4 478 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 LRRC14BA6NHZ5 514 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 CD8B2A6NJW9 211 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 AHRRA9YTQ3 701 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 OR6B1O95007 311 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 DPP4P27487 766 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 IL1R2P27930 398 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 HMGCLP35914 325 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 CPA2P48052 419 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ME1P48163 572 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 TRPC1P48995 793 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 NDUFA8P51970 172 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ZBTB17Q13105 803 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ABRAXAS2Q15018 415 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 SF3B4Q15427 424 aaKnown RBP eCLIP5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 NDUFAF5Q5TEU4 345 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 MFSD4BQ5TF39 518 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 FAM166AQ6J272 317 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ZNF474Q6S9Z5 364 aaPredicted RBP5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 TMCO3Q6UWJ1 677 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ADGRE4PQ86SQ3 457 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 BANPQ8N9N5 519 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 OR5K2Q8NHB8 316 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 NSMCE1Q8WV22 266 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 AKAP1Q92667 903 aaKnown RBP eCLIP5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 QRFPRQ96P65 431 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 LPAR4Q99677 370 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 TIMP4Q99727 224 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 RHNO1Q9BSD3 238 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 MED18Q9BUE0 208 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 SELENOOQ9BVL4 669 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ADGRE3Q9BY15 652 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 OR10A2Q9H208 303 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 LDAHQ9H6V9 325 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 CATSPERZQ9NTU4 200 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 HCN3Q9P1Z3 774 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 C19orf25Q9UFG5 118 aaPredicted RBP5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 CDC14AQ9UNH5 594 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ASF1AQ9Y294 204 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 TRAF6Q9Y4K3 522 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 ATP23Q9Y6H3 246 aa5.72□□□□□ -1.49
AC090888.3-201ENST00000558917 CSMD3Q7Z407 3707 aa5.71□□□□□ -1.49
AC090888.3-201ENST00000558917 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 IGKV1-8A0A0C4DH67 115 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 A0A1W2PPV9 198 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 OR2A25A4D2G3 310 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 KLHL33A6NCF5 533 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 LRRC3CA6NJW4 275 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 TARM1B6A8C7 271 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 ERN1O75460 977 aaKnown RBP5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CDC123O75794 336 aaPredicted RBP5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 TNFSF13O75888 250 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 AP2A1O95782 977 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 SERPINC1P01008 464 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CYC1P08574 325 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 ANXA5P08758 320 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 KRT15P19012 456 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CD9P21926 228 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CA4P22748 312 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 MIPP30301 263 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 MC4RP32245 332 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CPOXP36551 454 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 XCR1P46094 333 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 AGTR2P50052 363 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 ACTN3Q08043 901 aaPredicted RBP5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 PNOCQ13519 176 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 NSDHLQ15738 373 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 PGGHGQ32M88 737 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 MON1BQ7L1V2 547 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 PEG10Q86TG7 708 aaKnown RBP5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 TBC1D21Q8IYX1 336 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CSNK1A1LQ8N752 337 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 CELF2-AS1Q8N7Q2 184 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 APCDD1LQ8NCL9 501 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 MSANTD4Q8NCY6 345 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 PLPP5Q8NEB5 264 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 OR51Q1Q8NH59 317 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 SPATA22Q8NHS9 363 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 NEIL3Q8TAT5 605 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 RAB3IL1Q8TBN0 382 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 ZNF398Q8TD17 642 aa5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 SREK1Q8WXA9 508 aaKnown RBP5.71□□□□□ -1.5
AC090888.3-201ENST00000558917 KAT2AQ92830 837 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms