RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 DET1Q7L5Y6 550 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CTU1Q7Z7A3 348 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF605Q86T29 641 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 FJX1Q86VR8 437 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CYP4Z1Q86W10 505 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 NLRP8Q86W28 1048 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 SYT12Q8IV01 421 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 UBQLNLQ8IYU4 475 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 ENTHD1Q8IYW4 607 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 RGL4Q8IZJ4 473 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 OXR1Q8N573 874 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 EIF4E3Q8N5X7 224 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 POC5Q8NA72 575 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 ATG16L2Q8NAA4 619 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 AVL9Q8NBF6 648 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CAMKVQ8NCB2 501 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CLRN3Q8NCR9 226 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 IL17RDQ8NFM7 739 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 OR52B6Q8NGF0 335 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 ST7LQ8TDW4 575 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 ELP5Q8TE02 316 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 NR4A3Q92570 626 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 SLC38A4Q969I6 547 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 RNF166Q96A37 237 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 FBXL8Q96CD0 374 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 LRIG1Q96JA1 1093 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 HRASLS5Q96KN8 279 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 FCRL1Q96LA6 429 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PANX1Q96RD7 426 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 MBOAT4Q96T53 435 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PITX2Q99697 317 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PTPN18Q99952 460 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 MAPKAP1Q9BPZ7 522 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CCDC32Q9BV29 185 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 KLF16Q9BXK1 252 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 GABARAPL3Q9BY60 117 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 BCL2L14Q9BZR8 327 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 BHLHE41Q9C0J9 482 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 NSUN3Q9H649 340 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CCDC86Q9H6F5 360 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 RASSF1Q9NS23 344 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 AHSPQ9NZD4 102 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CNOT2Q9NZN8 540 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 VAPAQ9P0L0 249 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 SH3BP4Q9P0V3 963 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 NFKBIL1Q9UBC1 381 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 CPNE7Q9UBL6 633 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 VPS29Q9UBQ0 182 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 LHX3Q9UBR4 397 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 MBD1Q9UIS9 605 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 SLC25A13Q9UJS0 675 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF225Q9UK10 706 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 INTS6Q9UL03 887 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 NDRG4Q9ULP0 352 aaKnown RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 GAB2Q9UQC2 676 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 LIPT1Q9Y234 373 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 KLHL20Q9Y2M5 609 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PRG3Q9Y2Y8 225 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PPIL1Q9Y3C6 166 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PCDHB11Q9Y5F2 797 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PCDHGC4Q9Y5F7 938 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PCDHGA2Q9Y5H1 932 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 KLK4Q9Y5K2 254 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 PIAS3Q9Y6X2 628 aa5.28□□□□□ -1.56
GABPB1-207ENST00000558335 KIAA1671Q9BY89 1806 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 IGLV3-16A0A075B6K0 115 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 A0A0D9SEW6 157 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 MYOCOSA0A1B0GUC4 107 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 RAB19A4D1S5 217 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 PMS2P1A4D2B8 440 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 FAM86C2PA6NEL3 165 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 CCDC182A6NF36 153 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 MGAT4DA6NG13 374 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 LRRC14BA6NHZ5 514 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 EFCAB9A8MZ26 197 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 MYO1GB0I1T2 1018 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 LOC730098B7Z3J9 87 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 PTGES3LE9PB15 166 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 RNASET2O00584 256 aaKnown RBP5.27□□□□□ -1.57
GABPB1-207ENST00000558335 PPP6CO00743 305 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 AP3D1O14617 1153 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 FPGTO14772 594 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 RGS5O15539 181 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 ADAM12O43184 909 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 COCHO43405 550 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 PLOD3O60568 738 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 TBL1XO60907 577 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 ZNF682O95780 498 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 GLAP06280 429 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 CNPP09543 421 aaKnown RBP5.27□□□□□ -1.57
GABPB1-207ENST00000558335 OR4Q2P0C623 313 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 PRF1P14222 555 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 COX7A2P14406 83 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 CD1EP15812 388 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 DDCP20711 480 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 ZP3P21754 424 aa5.27□□□□□ -1.57
GABPB1-207ENST00000558335 MATN1P21941 496 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms