RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 C16orf97H3BN30 126 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 MAPK13O15264 365 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 EXTL3O43909 919 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CYTIPO60759 359 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SAP30O75446 220 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SPAG6O75602 509 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 EML2O95834 649 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 NGFP01138 241 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ASNSP08243 561 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 HIST1H2AGP0C0S8 130 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CLUP10909 449 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 TMOD1P28289 359 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 FCGR2BP31994 310 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CEACAM8P31997 349 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 DLSTP36957 453 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ACADSBP45954 432 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SLC6A8P48029 635 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CD151P48509 253 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 DSCR9P59020 149 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 HERV-K104P61576 105 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CDR2Q01850 454 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 LTBQ06643 244 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 HSPA14Q0VDF9 509 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 GPM6BQ13491 265 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM132DQ14C87 1099 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 P2RY6Q15077 328 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 OR1C1Q15619 314 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 DUSP5Q16690 384 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CCDC142Q17RM4 750 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF528Q3MIS6 628 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SLC36A3Q495N2 470 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 TECRLQ5HYJ1 363 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CAPN13Q6MZZ7 669 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 TRIM65Q6PJ69 517 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 LPCAT2Q7L5N7 544 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 VASH2Q86V25 355 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SLC22A16Q86VW1 577 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ELMOD1Q8N336 334 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 PARP8Q8N3A8 854 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 FAM89BQ8N5H3 189 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 IQCF1Q8N6M8 205 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CCDC185Q8N715 623 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 STKLD1Q8NE28 680 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 OR1L3Q8NH93 324 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CHPT1Q8WUD6 406 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 APOBEC4Q8WW27 367 aaKnown RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 HIST1H2ACQ93077 130 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 PCED1BQ96HM7 432 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF778Q96MU6 729 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF48Q96MX3 618 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 DEFB118Q96PH6 123 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 GPA33Q99795 319 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CCM2Q9BSQ5 444 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ZSCAN5AQ9BUG6 496 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 PUS3Q9BZE2 481 aaKnown RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 POLR1EQ9GZS1 481 aaKnown RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SUDS3Q9H7L9 328 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 EVA1AQ9H8M9 152 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 VIPAS39Q9H9C1 493 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 C3orf14Q9HBI5 128 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 S100A14Q9HCY8 104 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CD93Q9NPY3 652 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 INTS9Q9NV88 658 aaKnown RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 HOXC10Q9NYD6 342 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 RDH8Q9NYR8 311 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 FLRT3Q9NZU0 649 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 RAI14Q9P0K7 980 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 TAAR2Q9P1P5 351 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ERVK-18Q9QC07 812 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 BCAP29Q9UHQ4 241 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 ELF5Q9UKW6 265 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 GRID1Q9ULK0 1009 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 PLCL2Q9UPR0 1127 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 FOXJ3Q9UPW0 622 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 CHMP2BQ9UQN3 213 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 EVPLQ92817 2033 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 PIK3R4Q99570 1358 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 KIF7Q2M1P5 1343 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 UMODL1Q5DID0 1318 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 IGHV4-61A0A0C4DH41 118 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 PLSCR5A0PG75 271 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 ZSCAN5CA6NGD5 496 aaPredicted RBP2.78□□□□□ -1.96
TRAV28-201ENST00000557548 YJEFN3A6XGL0 299 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 BOLA2-SMG1P6H3BVE0 249 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 UBXN8O00124 270 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 XPO1O14980 1071 aaKnown RBP2.78□□□□□ -1.96
TRAV28-201ENST00000557548 P2RX6O15547 441 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 CIDEAO60543 219 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 TSC22D2O75157 780 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 LRCH4O75427 683 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 CSDE1O75534 798 aaKnown RBP2.78□□□□□ -1.96
TRAV28-201ENST00000557548 KRT33AO76009 404 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 PPP1R3DO95685 299 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 MBD3O95983 291 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 IGHV4-59P01825 116 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 GPIP06744 558 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 APRTP07741 180 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 NGFRP08138 427 aa2.78□□□□□ -1.96
TRAV28-201ENST00000557548 ATP6V1C1P21283 382 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms