RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RPLP0P05388 317 aaKnown RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 BDNFP23560 247 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 GPR183P32249 361 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 HSPA4P34932 840 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 NNMTP40261 264 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 RPS8P62241 208 aaKnown RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 SRPXP78539 464 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 BECN1Q14457 450 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 CCDC158Q5M9N0 1113 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 GPR139Q6DWJ6 353 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 PRR5LQ6MZQ0 368 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 ZSCAN25Q6NSZ9 544 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 CENPVQ7Z7K6 275 aaPredicted RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 ZC3H3Q8IXZ2 948 aaKnown RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 PARP8Q8N3A8 854 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 C11orf42Q8N5U0 333 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 OR4C15Q8NGM1 316 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 C11orf52Q96A22 123 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 NEDD4LQ96PU5 975 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 LSG1Q9H089 658 aaKnown RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 IL1RAPQ9NPH3 570 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 TBC1D7Q9P0N9 293 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 HMG20BQ9P0W2 317 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 CHORDC1Q9UHD1 332 aaPredicted RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 PILRBQ9UKJ0 227 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 TTLL3Q9Y4R7 772 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 SALL1Q9NSC2 1324 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 PARP14Q460N5 1801 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 PTPRFP10586 1907 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 hCG_38984A0A1B0GV85 526 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 TCRBV21S2A2A0A5A6 115 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 SYNDIG1LA6NDD5 238 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 AP5Z1O43299 807 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 ADAM20O43506 726 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 SPRY1O43609 319 aaPredicted RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 AHCYL1O43865 530 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 SERPING1P05155 500 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 F3P13726 295 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 FDPSP14324 419 aaKnown RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 C4BPBP20851 252 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 ZBTB25P24278 435 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 AZGP1P25311 298 aaKnown RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 GSK3BP49841 420 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 ABCE1P61221 599 aaKnown RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 ILF2Q12905 390 aaKnown RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 SLC15A2Q16348 729 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 ATAD3CQ5T2N8 411 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 LEMD1Q68G75 181 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 PRSS55Q6UWB4 352 aaPredicted RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 CCDC60Q8IWA6 550 aaPredicted RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 CCDC89Q8N998 374 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 AVL9Q8NBF6 648 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 SLC4A11Q8NBS3 891 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 OR9Q2Q8NGE9 314 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 MRAPQ8TCY5 172 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 ZIM3Q96PE6 472 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 HNRNPABQ99729 332 aaKnown RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 ALDH8A1Q9H2A2 487 aaPredicted RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 MORF4L1Q9UBU8 362 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 KLK11Q9UBX7 282 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 ANAPC2Q9UJX6 822 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 FBXL4Q9UKA2 621 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 PILRAQ9UKJ1 303 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 NAALAD2Q9Y3Q0 740 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 UMODL1Q5DID0 1318 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 CCDC171Q6TFL3 1326 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 WDR19Q8NEZ3 1342 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 PASKQ96RG2 1323 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 COL1A1P02452 1464 aaPredicted RBP3.07□□□□□ -1.92
VRK1-207ENST00000557352 ADAMTSL1Q8N6G6 1762 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 LOXHD1Q8IVV2 1947 aa3.07□□□□□ -1.92
VRK1-207ENST00000557352 IGHV3-16A0A0C4DH30 117 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 A0A0D9SFI3 127 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 RPL37AP8A6NKH3 93 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 K7EQG2 157 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 MAGEB2O15479 319 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 RNF113AO15541 343 aaKnown RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 FIBPO43427 364 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 ADORA3P0DMS8 318 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 CD59P13987 128 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 SFTPDP35247 375 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 DRD3P35462 400 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 SCN4AP35499 1836 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 LIMK1P53667 647 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 TIMM10P62072 90 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 ACY1Q03154 408 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 PRPF4BQ13523 1007 aaKnown RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 CAPRIN1Q14444 709 aaKnown RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 ALX1Q15699 326 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 LETM2Q2VYF4 491 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 CAVIN4Q5BKX8 364 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 OLFML2AQ68BL7 652 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 FAM205AQ6ZU69 1335 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 RAPH1Q70E73 1250 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 ENOSF1Q7L5Y1 443 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 RBBP6Q7Z6E9 1792 aaKnown RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 CARM1Q86X55 608 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms