RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 DNASE1L3Q13609 305 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 PTGR1Q14914 329 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 FAM71E1Q6IPT2 247 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 MTERF4Q7Z6M4 381 aaKnown RBP16.39■□□□□ 0.21
TUBB3-211ENST00000556536 CLNKQ7Z7G1 428 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 IL22RA1Q8N6P7 574 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 ADAMTS18Q8TE60 1221 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 NUDT8Q8WV74 236 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 GFM2Q969S9 779 aaKnown RBP16.39■□□□□ 0.21
TUBB3-211ENST00000556536 MIEF2Q96C03 454 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 RILPQ96NA2 401 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 BBC3Q96PG8 261 aaPredicted RBP16.39■□□□□ 0.21
TUBB3-211ENST00000556536 OR1F2PQ96R84 312 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 WDR54Q9H977 334 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 MYNNQ9NPC7 610 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 AIG1Q9NVV5 245 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 MS4A12Q9NXJ0 267 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 DKK4Q9UBT3 224 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 RAXQ9Y2V3 346 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 PCDHA9Q9Y5H5 950 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 SPACA6W5XKT8 324 aa16.39■□□□□ 0.21
TUBB3-211ENST00000556536 UBDO15205 165 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 AKAP10O43572 662 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 SNX3O60493 162 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 LRATO95237 230 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 IL10P22301 178 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 BUD31P41223 144 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 NME5P56597 212 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 PCBP4P57723 403 aaKnown RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 RPS18P62269 152 aaKnown RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 BTG2P78543 158 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 KLC1Q07866 573 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 C2orf80Q0P641 193 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 SRSF6Q13247 344 aaKnown RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 CLN3Q13286 438 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 MINDY4Q4G0A6 757 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 MED25Q71SY5 747 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 VASH2Q86V25 355 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 PARP9Q8IXQ6 854 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 TMEM132CQ8N3T6 1108 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 NAF1Q96HR8 494 aaKnown RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 CATSPER2Q96P56 530 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 CCT8L2Q96SF2 557 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 ACTL8Q9H568 366 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 ASH1LQ9NR48 2969 aaKnown RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 C14orf105Q9NVL8 296 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 C5AR2Q9P296 337 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 FARSAQ9Y285 508 aaKnown RBP16.38■□□□□ 0.21
TUBB3-211ENST00000556536 GPR45Q9Y5Y3 372 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 SCN3AQ9NY46 2000 aa16.38■□□□□ 0.21
TUBB3-211ENST00000556536 C21orf140B9A014 251 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 GUCY1B2O75343 617 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 RECKO95980 971 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 TLX1P31314 330 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-211ENST00000556536 GSTM5P46439 218 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 ALDH9A1P49189 494 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 RHAGQ02094 409 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 PRSS53Q2L4Q9 553 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 MFSD4BQ5TF39 518 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 IKBIPQ70UQ0 350 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 PIGWQ7Z7B1 504 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 ZNF595Q8IYB9 648 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 KRTCAP2Q8N6L1 136 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 FAIM2Q9BWQ8 316 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 VN1R1Q9GZP7 353 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 RPF2Q9H7B2 306 aaKnown RBP16.37■□□□□ 0.21
TUBB3-211ENST00000556536 WDR70Q9NW82 654 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 IL17BQ9UHF5 180 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 CES1P1Q9UKY3 287 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 MKL2Q9ULH7 1088 aa16.37■□□□□ 0.21
TUBB3-211ENST00000556536 PTRH2Q9Y3E5 179 aaKnown RBP16.37■□□□□ 0.21
TUBB3-211ENST00000556536 MRPS18BQ9Y676 258 aaKnown RBP16.37■□□□□ 0.21
TUBB3-211ENST00000556536 FER1L5A0AVI2 2057 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 MYOCOSA0A1B0GUC4 107 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 TGFBR3LH3BV60 316 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 ANKRD28O15084 1053 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 UMODP07911 640 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 DRD2P14416 443 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 LIFP15018 202 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 DDCP20711 480 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 MAOAP21397 527 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 JAK1P23458 1154 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 PTPN4P29074 926 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 ASMTP46597 345 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 RPS15P62841 145 aaKnown RBP16.36■□□□□ 0.21
TUBB3-211ENST00000556536 ID2Q02363 134 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 HEPACAMQ14CZ8 416 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 ANKRD26P1Q6NSI1 321 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 SLC48A1Q6P1K1 146 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 SCUBE1Q8IWY4 988 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 OR4N5Q8IXE1 308 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 OR2Y1Q8NGV0 311 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 SNIP1Q8TAD8 396 aaKnown RBP16.36■□□□□ 0.21
TUBB3-211ENST00000556536 DNAJB14Q8TBM8 379 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 TANKQ92844 425 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 TSLPQ969D9 159 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 ANKRD9Q96BM1 317 aaPredicted RBP16.36■□□□□ 0.21
TUBB3-211ENST00000556536 TEX37Q96LM6 180 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 MESP1Q9BRJ9 268 aa16.36■□□□□ 0.21
TUBB3-211ENST00000556536 CRB3Q9BUF7 120 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms