RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 DNA2P51530 1060 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 KRT83P78385 493 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 IRX4P78413 519 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 NUCB1Q02818 461 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 BAATQ14032 418 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 TOMM20Q15388 145 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 EXT1Q16394 746 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 C15orf32Q32M92 178 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 DNAJC21Q5F1R6 531 aaKnown RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 MFSD4BQ5TF39 518 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 ARMC3Q5W041 872 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 CFAP161Q6P656 301 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 ZFAND4Q86XD8 727 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 ZNF584Q8IVC4 421 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 TDRD5Q8NAT2 981 aaKnown RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 C9orf43Q8TAL5 461 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 NPRL2Q8WTW4 380 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 C17orf50Q8WW18 174 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 ATL1Q8WXF7 558 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 N4BP2L2Q92802 583 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 RMDN2Q96LZ7 410 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 OVOL2Q9BRP0 275 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 TDRD1Q9BXT4 1180 aaKnown RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 ZMYND12Q9H0C1 365 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 GPN1Q9HCN4 374 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 CYP39A1Q9NYL5 469 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 CLIP2Q9UDT6 1046 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 ADD3Q9UEY8 706 aaKnown RBP4.01□□□□□ -1.77
PRPF39-209ENST00000556353 WDFY3Q8IZQ1 3526 aa4.01□□□□□ -1.77
PRPF39-209ENST00000556353 SPTBN2O15020 2390 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 PRRC2AP48634 2157 aaKnown RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 ZMYM6O95789 1325 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 EPOPA6NHQ4 379 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 SRRM5B3KS81 715 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 GJB3O75712 270 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 KIAA0754O94854 1291 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TIMP1P01033 207 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 ZFYP08048 801 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 TSPY3P0CV98 308 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TSPY8P0CW00 308 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 PDHBP11177 359 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 MYOGP15173 224 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CDC25CP30307 473 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 SOX3P41225 446 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 HAND2P61296 217 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 PSMC6P62333 389 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 SARNPP82979 210 aaKnown RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 ZFP36L1Q07352 338 aaKnown RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 SGCGQ13326 291 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TMEM132DQ14C87 1099 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 PTPN14Q15678 1187 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 RILPL1Q5EBL4 403 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 PRR27Q6MZM9 219 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 ZSCAN25Q6NSZ9 544 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 C16orf54Q6UWD8 224 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 LCLAT1Q6UWP7 414 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CXCL17Q6UXB2 119 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CCBE1Q6UXH8 406 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 TLK2Q86UE8 772 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 C11orf53Q8IXP5 236 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 MYOCDQ8IZQ8 938 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CFAP61Q8NHU2 1237 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TAF4BQ92750 862 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 PTERQ96BW5 349 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TBC1D31Q96DN5 1066 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CNRIP1Q96F85 164 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 ZNF414Q96IQ9 312 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 RSRC1Q96IZ7 334 aaKnown RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 GSDMAQ96QA5 445 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CCDC3Q9BQI4 270 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 SDF4Q9BRK5 362 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 NAPBQ9H115 298 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 ABCG4Q9H172 646 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TRPV6Q9H1D0 765 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 RWDD1Q9H446 243 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 MTHFD2LQ9H903 347 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 MYNNQ9NPC7 610 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 MED4Q9NPJ6 270 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TRPV5Q9NQA5 729 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4□□□□□ -1.77
PRPF39-209ENST00000556353 MRPL15Q9P015 296 aaKnown RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 CRNNQ9UBG3 495 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 CTSZQ9UBR2 303 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 TBC1D29Q9UFV1 150 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 STX8Q9UNK0 236 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 CHKBQ9Y259 395 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 KMT2EQ8IZD2 1858 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 ARID2Q68CP9 1835 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 EP300Q09472 2414 aaPredicted RBP4□□□□□ -1.77
PRPF39-209ENST00000556353 ASPMQ8IZT6 3477 aa4□□□□□ -1.77
PRPF39-209ENST00000556353 ELP1O95163 1332 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 DOCK6Q96HP0 2047 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 CHD8Q9HCK8 2581 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 hCG_1807616A0A1W2PRN6 198 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 A8MV72 311 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 BAG2O95816 211 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 KRTAP1-4P0C5Y4 121 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 LINGO3P0C6S8 592 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 GOLGA8HP0CJ92 632 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms