RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 GON4LQ3T8J9 2241 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 MDC1Q14676 2089 aaKnown RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 B4DGG1 531 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 DLGAP1O14490 977 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 PROM1O43490 865 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF682O95780 498 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SEMG1P04279 462 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF23P17027 643 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 FASLGP48023 281 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 LSSP48449 732 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 PRIM2P49643 509 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 NXPH1P58417 271 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 BTN3A2P78410 334 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 TXNL4AP83876 142 aaKnown RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 EEF1A2Q05639 463 aaKnown RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 MYBPC3Q14896 1274 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF630Q2M218 657 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ARMC6Q6NXE6 501 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 UGT2A3Q6UWM9 527 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 CCDC80Q76M96 950 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 RNF44Q7L0R7 432 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 RNF130Q86XS8 419 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 OR5AK3PQ8NH89 298 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 DNASE2BQ8WZ79 361 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 UCN3Q969E3 161 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 TMBIM1Q969X1 311 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 TBC1D20Q96BZ9 403 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 MIR1-1HGQ9H1L0 117 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 IL1RAPQ9NPH3 570 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZSCAN32Q9NX65 697 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 C5AR2Q9P296 337 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SCOCQ9UIL1 159 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 UTS2RQ9UKP6 389 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 CES1P1Q9UKY3 287 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 A0A0J9YVX5 310 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 MYO1GB0I1T2 1018 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 AIFM1O95831 613 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 UBTFL6P0CB48 400 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF888P0CJ79 500 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ARAFP10398 606 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 CERS1P27544 350 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 NTSP30990 170 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 HNRNPKP61978 463 aaKnown RBP eCLIP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SUZ12Q15022 739 aaKnown RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 FAM180BQ6P0A1 224 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SLC48A1Q6P1K1 146 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 TMEM154Q6P9G4 183 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 C17orf82Q86X59 251 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ZDHHC21Q8IVQ6 265 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SVOPLQ8N434 492 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 LMX1AQ8TE12 382 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 TFAP2CQ92754 450 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 MAL2Q969L2 176 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 AMDHD1Q96NU7 426 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SERINC2Q96SA4 455 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-205ENST00000556096 GLIPR2Q9H4G4 154 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 ADPRHL2Q9NX46 363 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 POMT2Q9UKY4 750 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 MAP4K5Q9Y4K4 846 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 SNX8Q9Y5X2 465 aa13.93□□□□□ -0.18
VPS33B-205ENST00000556096 VPS13AQ96RL7 3174 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 TDRD6O60522 2096 aaKnown RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 EI24O14681 340 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 PGRMC2O15173 223 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 ZSCAN9O15535 394 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 GCM2O75603 506 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 MAGEA8P43361 318 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 CHN2P52757 468 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 DSTNP60981 165 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 CDK6Q00534 326 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 HSPB3Q12988 150 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 BIRC2Q13490 618 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 SCARB2Q14108 478 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 CEBPEQ15744 281 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF528Q3MIS6 628 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 KLHL35Q6PF15 583 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 CEP68Q76N32 757 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 ZDHHC13Q8IUH4 622 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 CHERPQ8IWX8 916 aaKnown RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 ARL14Q8N4G2 192 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF655Q8N720 491 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 ATOH1Q92858 354 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 RERGQ96A58 199 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 BBS4Q96RK4 519 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-205ENST00000556096 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 PRDM9Q9NQV7 894 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 UBAP1Q9NZ09 502 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 FBXW2Q9UKT8 454 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 DOLKQ9UPQ8 538 aa13.92□□□□□ -0.18
VPS33B-205ENST00000556096 SPAG17Q6Q759 2223 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 SDK1Q7Z5N4 2213 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 LILRA5A6NI73 299 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 H0YGG7 62 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 GNGT2O14610 69 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 P2RX6O15547 441 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 SUV39H1O43463 412 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms