RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 KLK8O60259 260 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CTNSO60931 367 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 TFEBP19484 476 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CHRNB4P30926 498 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 RFC3P40938 356 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CASP2P42575 452 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 MAGEA4P43358 317 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 MEOX1P50221 254 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 IRF8Q02556 426 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CHIT1Q13231 466 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 TBCCQ15814 346 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 EMC4Q5J8M3 183 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 PAGE2BQ5JRK9 111 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 GRTP1Q5TC63 336 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 ZNF793Q6ZN11 406 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 C16orf47Q6ZP98 133 aaPredicted RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 CLNKQ7Z7G1 428 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CCDC71Q8IV32 467 aaPredicted RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 SULF2Q8IWU5 870 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 CYP4Z2PQ8N1L4 340 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 PPM1NQ8N819 430 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 STAG3L4Q8TBR4 150 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 FAM57AQ8TBR7 257 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 FBF1Q8TES7 1133 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 ZNF473Q8WTR7 871 aaKnown RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 ASB5Q8WWX0 329 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 EXT2Q93063 718 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 ALPK1Q96QP1 1244 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 ATOH8Q96SQ7 321 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 COPS7BQ9H9Q2 264 aaPredicted RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 LIN28AQ9H9Z2 209 aaKnown RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 ADAP2Q9NPF8 381 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 KCNJ16Q9NPI9 418 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 DNAJB12Q9NXW2 375 aaKnown RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 KLF13Q9Y2Y9 288 aaPredicted RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 UTP11Q9Y3A2 253 aaKnown RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 CSPG4Q6UVK1 2322 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 HRNRQ86YZ3 2850 aaPredicted RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 A0A1B0GTH9 108 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 RTCAO00442 366 aaKnown RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 PEX1O43933 1283 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 ZFAND5O76080 213 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 ZWINTO95229 277 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 S100BP04271 92 aaPredicted RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 ATP5A1P25705 553 aaKnown RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 CRABP2P29373 138 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 CASQ1P31415 396 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 MSH2P43246 934 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 SSR4P51571 173 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 NR0B1P51843 470 aaKnown RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 ETF1P62495 437 aaKnown RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 GUCY2DQ02846 1103 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 CAV1Q03135 178 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 PCDH1Q08174 1060 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 TGM3Q08188 693 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 LAPTM5Q13571 262 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 SLMAPQ14BN4 828 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 EFTUD2Q15029 972 aaKnown RBP eCLIP10.03□□□□□ -0.8
TDP1-212ENST00000555565 ELAVL1Q15717 326 aaKnown RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 HIST2H2ACQ16777 129 aaPredicted RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 CMPK2Q5EBM0 449 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 TMEM198Q66K66 360 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 HIST2H2AA3Q6FI13 130 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 RAPH1Q70E73 1250 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 LRRC70Q7Z2Q7 622 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 TBC1D1Q86TI0 1168 aaPredicted RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 CD163Q86VB7 1156 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 EID3Q8N140 333 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 C17orf53Q8N3J3 647 aaPredicted RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 TMEM132CQ8N3T6 1108 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 TMEM156Q8N614 296 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 ACOT4Q8N9L9 421 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 POGLUT1Q8NBL1 392 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 WFDC11Q8NEX6 87 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 OR7G3Q8NG95 312 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 C16orf52Q8NHV5 167 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 PTPMT1Q8WUK0 201 aaPredicted RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 MBD6Q96DN6 1003 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 KCNC2Q96PR1 638 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 MAPKAP1Q9BPZ7 522 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 CCDC77Q9BR77 488 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 TBCDQ9BTW9 1192 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 MS4A8Q9BY19 250 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 ALOXE3Q9BYJ1 711 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 NMRAL1Q9HBL8 299 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 LYRM4Q9HD34 91 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 NUDT4Q9NZJ9 180 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 VTI1BQ9UEU0 232 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 PLEKHA6Q9Y2H5 1048 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 YARS2Q9Y2Z4 477 aaKnown RBP10.03□□□□□ -0.8
TDP1-212ENST00000555565 L3MBTL1Q9Y468 752 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 CLCA3PQ9Y6N3 262 aa10.03□□□□□ -0.8
TDP1-212ENST00000555565 COL6A5A8TX70 2615 aa10.02□□□□□ -0.81
TDP1-212ENST00000555565 HMX2A2RU54 273 aa10.02□□□□□ -0.81
TDP1-212ENST00000555565 SYNDIG1LA6NDD5 238 aa10.02□□□□□ -0.81
TDP1-212ENST00000555565 SUPT3HB4E1H0 165 aa10.02□□□□□ -0.81
TDP1-212ENST00000555565 KLRC4-KLRK1H3BQV0 150 aa10.02□□□□□ -0.81
TDP1-212ENST00000555565 K7EPI3 171 aa10.02□□□□□ -0.81
TDP1-212ENST00000555565 UBXN8O00124 270 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms