RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CHCHD3Q9NX63 227 aaKnown RBP2.37□□□□□ -2.03
SNX6-204ENST00000555541 PFASO15067 1338 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 CCDC162PA2VCL2 907 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 TNFSF11O14788 317 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 CLN5O75503 358 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 GRAP2O75791 330 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 LYNP07948 512 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 VIMP08670 466 aaKnown RBP2.36□□□□□ -2.03
SNX6-204ENST00000555541 CCDC159P0C7I6 412 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 FAM58BPP0C7Q3 252 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 FOSL2P15408 326 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 ELK1P19419 428 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 ID1P41134 155 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 ERVPABLB-1P60509 514 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 GSG1Q2KHT4 349 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 C9orf129Q5T035 196 aaKnown RBP2.36□□□□□ -2.03
SNX6-204ENST00000555541 ZNF730Q6ZMV8 503 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 SPATA21Q7Z572 469 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 ANKRD46Q86W74 232 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 LSMEM1Q8N8F7 131 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 TBCKQ8TEA7 893 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 U2AF1L4Q8WU68 220 aaKnown RBP2.36□□□□□ -2.03
SNX6-204ENST00000555541 RBM18Q96H35 190 aaKnown RBP2.36□□□□□ -2.03
SNX6-204ENST00000555541 MAPKAP1Q9BPZ7 522 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 CENPOQ9BU64 300 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 ZNF319Q9P2F9 582 aa2.36□□□□□ -2.03
SNX6-204ENST00000555541 WI2-2373I1.2A0A1W2PRP0 233 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 ILVBLA1L0T0 632 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 HTR3EA5X5Y0 456 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 SAP18O00422 153 aaKnown RBP2.35□□□□□ -2.03
SNX6-204ENST00000555541 MCF2LO15068 1137 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 RPN1P04843 607 aaKnown RBP2.35□□□□□ -2.03
SNX6-204ENST00000555541 ZNF32P17041 273 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 GPX3P22352 226 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 GDF1P27539 372 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 FNTAP49354 379 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 ZNF41P51814 821 aaPredicted RBP2.35□□□□□ -2.03
SNX6-204ENST00000555541 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 C1orf141Q5JVX7 400 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 LYPLAL1Q5VWZ2 237 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 UBQLNLQ8IYU4 475 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 CCDC191Q8NCU4 936 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 SGF29Q96ES7 293 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 ERGIC2Q96RQ1 377 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 OR10A4Q9H209 315 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 GMEB2Q9UKD1 530 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 RNF24Q9Y225 148 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 TMED7Q9Y3B3 224 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 TTLL3Q9Y4R7 772 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 ETV7Q9Y603 341 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 ARID1AO14497 2285 aa2.35□□□□□ -2.03
SNX6-204ENST00000555541 SELENOFO60613 162 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 LYPD3O95274 346 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 HOXC4P09017 264 aaPredicted RBP2.34□□□□□ -2.03
SNX6-204ENST00000555541 P0C879 139 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 HMGCLP35914 325 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 NPBWR1P48145 328 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 CAPZA1P52907 286 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 SLC25A1P53007 311 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 FKBP1BP68106 108 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 CXCL6P80162 114 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 FOLH1Q04609 750 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 SLC17A1Q14916 467 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 TOMM20Q15388 145 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 TGIF1Q15583 401 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 C14orf28Q4W4Y0 310 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 PM20D1Q6GTS8 502 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 IGFL2Q6UWQ7 119 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 ABRAXAS1Q6UWZ7 409 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 DZIP1Q86YF9 867 aaKnown RBP2.34□□□□□ -2.03
SNX6-204ENST00000555541 Q8NFD4 153 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 BSCL2Q96G97 398 aaPredicted RBP2.34□□□□□ -2.03
SNX6-204ENST00000555541 CNDP2Q96KP4 475 aaKnown RBP2.34□□□□□ -2.03
SNX6-204ENST00000555541 FERMT1Q9BQL6 677 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 ZNF665Q9H7R5 613 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 MINDY3Q9H8M7 445 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 PFDN4Q9NQP4 134 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 ABCC13Q9NSE7 274 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 RCOR3Q9P2K3 495 aaPredicted RBP2.34□□□□□ -2.03
SNX6-204ENST00000555541 MOKQ9UQ07 419 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 EXOC6BQ9Y2D4 811 aa2.34□□□□□ -2.03
SNX6-204ENST00000555541 GTPBP10A4D1E9 387 aaKnown RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 CCT8L1PA6NM43 557 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 RNF212BA8MTL3 300 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 CCSO14618 274 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 CSDE1O75534 798 aaKnown RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 OR6A2O95222 327 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 FCGR3AP08637 254 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 ODC1P11926 461 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 KRT20P35900 424 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 GSTO1P78417 241 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 PAX2Q02962 417 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 LCP2Q13094 533 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 KIAA0040Q15053 153 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 ISXQ2M1V0 245 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 TWISTNBQ3B726 338 aaPredicted RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 IQCCQ4KMZ1 466 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 WDR25Q64LD2 544 aaPredicted RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 ALKBH5Q6P6C2 394 aaKnown RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 ZNF530Q6P9A1 599 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms