RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ADAMDEC1O15204 470 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 KCNJ13O60928 360 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 SSR2P43308 183 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 CDH12P55289 794 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 SPIBQ01892 262 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 MAPK11Q15759 364 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 DUSP7Q16829 419 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 FGD3Q5JSP0 725 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 C6orf120Q7Z4R8 191 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 OR2L3Q8NG85 312 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 OR1E3Q8WZA6 343 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 ZNF347Q96SE7 839 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 PITX2Q99697 317 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 RAB11FIP5Q9BXF6 653 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 ERVK-18Q9QC07 812 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 PNMA8BQ9ULN7 279 aaPredicted RBP23.05■■□□□ 1.28
TMEM260-207ENST00000555497 HSPE1-MOB4S4R3N1 261 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 BRWD1Q9NSI6 2320 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 MAD2L1BPQ15013 274 aaPredicted RBP23.05■■□□□ 1.28
TMEM260-207ENST00000555497 EXOC3L2Q2M3D2 409 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 REEP3Q6NUK4 255 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 MTSS1LQ765P7 747 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 TSPYL5Q86VY4 417 aaPredicted RBP23.05■■□□□ 1.28
TMEM260-207ENST00000555497 TMEM145Q8NBT3 493 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 FAM81AQ8TBF8 368 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 SIPA1Q96FS4 1042 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 KCNC2Q96PR1 638 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 SERHL2Q9H4I8 314 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 TIMMDC1Q9NPL8 285 aa23.05■■□□□ 1.28
TMEM260-207ENST00000555497 AK4P27144 223 aaPredicted RBP23.04■■□□□ 1.28
TMEM260-207ENST00000555497 XCR1P46094 333 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 RXRGP48443 463 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 TMEM31Q5JXX7 168 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 NDUFAF5Q5TEU4 345 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 GEMIN6Q8WXD5 167 aaKnown RBP23.04■■□□□ 1.28
TMEM260-207ENST00000555497 MUL1Q969V5 352 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 CSF3RQ99062 836 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 APOL4Q9BPW4 351 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 GABARAPL3Q9BY60 117 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 INMTO95050 263 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 BCHEP06276 602 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 JUNDP17535 347 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 CD247P20963 164 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 CD72P21854 359 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 CD6P30203 668 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 TUBA3CQ13748 450 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 GPR153Q6NV75 609 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 SLC44A2Q8IWA5 706 aaPredicted RBP23.04■■□□□ 1.28
TMEM260-207ENST00000555497 NATD1Q8N6N6 113 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 OR10G2Q8NGC3 310 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 MS4A6EQ96DS6 147 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 OR2M4Q96R27 311 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 CCDC90BQ9GZT6 254 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 A4GALTQ9NPC4 353 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 RASSF1Q9NS23 344 aa23.04■■□□□ 1.28
TMEM260-207ENST00000555497 GLOD5A6NK44 160 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 ANHXE9PGG2 379 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 IFNA14P01570 189 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 TFPTP0C1Z6 253 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 TFF2Q03403 129 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 PUM1Q14671 1186 aaKnown RBP eCLIP23.03■■□□□ 1.28
TMEM260-207ENST00000555497 ENPP7Q6UWV6 458 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 ARMC8Q8IUR7 673 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 OR8K5Q8NH50 307 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 CCL4L1Q8NHW4 92 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 ZBED6CLQ96FA7 236 aaPredicted RBP23.03■■□□□ 1.28
TMEM260-207ENST00000555497 ZNF764Q96H86 408 aaPredicted RBP23.03■■□□□ 1.28
TMEM260-207ENST00000555497 TMEM19Q96HH6 336 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 DGCR6LQ9BY27 220 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 GLIPR2Q9H4G4 154 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 DUSP21Q9H596 190 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 NEUROD4Q9HD90 331 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 ACER3Q9NUN7 267 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 TAS2R7Q9NYW3 318 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 PCDHGA6Q9Y5G7 932 aa23.03■■□□□ 1.28
TMEM260-207ENST00000555497 HMGN4O00479 90 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 PCDHGA12O60330 932 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 WBP4O75554 376 aaKnown RBP23.02■■□□□ 1.28
TMEM260-207ENST00000555497 DNAJB5O75953 348 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 PTGER1P34995 402 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 LTBRP36941 435 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 SLC35A2P78381 396 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 EMX1Q04741 257 aaPredicted RBP23.02■■□□□ 1.28
TMEM260-207ENST00000555497 LRRC32Q14392 662 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 SPDYE7PQ495Y7 208 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 RD3Q7Z3Z2 195 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 MRGPRX1Q96LB2 322 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 NIPSNAP1Q9BPW8 284 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 FBRSQ9HAH7 460 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 PRDM7Q9NQW5 492 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 CLDND1Q9NY35 253 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 TMEM9Q9P0T7 183 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 SNX5Q9Y5X3 404 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 PCDH17O14917 1159 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 ACSL1P33121 698 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 STT3AP46977 705 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 CCT3P49368 545 aaKnown RBP23.02■■□□□ 1.28
TMEM260-207ENST00000555497 TMBIM6P55061 237 aa23.02■■□□□ 1.28
TMEM260-207ENST00000555497 GP2P55259 537 aaKnown RBP23.02■■□□□ 1.28
TMEM260-207ENST00000555497 NUP107P57740 925 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms