RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OAZ2O95190 189 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 TGM6O95932 706 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 TTPAP49638 278 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 ZNF91Q05481 1191 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 TAF10Q12962 218 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 ETFDHQ16134 617 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 ERICH5Q6P6B1 374 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 VTCN1Q7Z7D3 282 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 C1orf52Q8N6N3 182 aaKnown RBP14.98□□□□□ -0.01
SYNE3-203ENST00000554873 AP3S1Q92572 193 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 FOXJ1Q92949 421 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 B3GAT2Q9NPZ5 323 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 SLC6A13Q9NSD5 602 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 CCL27Q9Y4X3 112 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 PCDHGC4Q9Y5F7 938 aa14.98□□□□□ -0.01
SYNE3-203ENST00000554873 GREB1Q4ZG55 1949 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 INSIG1O15503 277 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 CD9P21926 228 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 SDC2P34741 201 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 PPP3R1P63098 170 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 GTF2H2Q13888 395 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 PCBP2Q15366 365 aaKnown RBP eCLIP14.97□□□□□ -0.01
SYNE3-203ENST00000554873 GTF2H2CQ6P1K8 395 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 METAP1DQ6UB28 335 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-203ENST00000554873 LIX1Q8N485 282 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 FUBP3Q96I24 572 aaKnown RBP eCLIP14.97□□□□□ -0.01
SYNE3-203ENST00000554873 OR52E6Q96RD3 313 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 DPY30Q9C005 99 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 GHITMQ9H3K2 345 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 SLCO1C1Q9NYB5 712 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 COA4Q9NYJ1 87 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 TRPM5Q9NZQ8 1165 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 PCDHGA2Q9Y5H1 932 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 SH3D21A4FU49 640 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 A8MXK9 166 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 SYN3O14994 580 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 GPR39O43194 453 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 OLFM2O95897 454 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 LALBAP00709 142 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 AGFG1P52594 562 aaKnown RBP14.97□□□□□ -0.01
SYNE3-203ENST00000554873 C2orf80Q0P641 193 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 ABRQ12979 859 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 CORO6Q6QEF8 472 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 RASSF6Q6ZTQ3 369 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 DENND1CQ8IV53 801 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 TTC16Q8NEE8 873 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 UTP15Q8TED0 518 aaKnown RBP14.97□□□□□ -0.01
SYNE3-203ENST00000554873 KCNJ9Q92806 393 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 TMEM175Q9BSA9 504 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 CINPQ9BW66 212 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-203ENST00000554873 RBCK1Q9BYM8 510 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 NDUFB11Q9NX14 153 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 NUDT4Q9NZJ9 180 aa14.97□□□□□ -0.01
SYNE3-203ENST00000554873 PLXNA3P51805 1871 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 MICAL3Q7RTP6 2002 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 AKAP8O43823 692 aaKnown RBP14.96□□□□□ -0.01
SYNE3-203ENST00000554873 MAPK1P28482 360 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 RPL38P63173 70 aaKnown RBP14.96□□□□□ -0.01
SYNE3-203ENST00000554873 ADGRF3Q8IZF5 1079 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 OR9Q1Q8NGQ5 310 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 OR2T4Q8NH00 348 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 ASB12Q8WXK4 309 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 HSH2DQ96JZ2 352 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 PRR14Q9BWN1 585 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 IPPKQ9H8X2 491 aa14.96□□□□□ -0.01
SYNE3-203ENST00000554873 LSM2Q9Y333 95 aaKnown RBP14.96□□□□□ -0.01
SYNE3-203ENST00000554873 C7orf66A4D0T2 115 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 M0R233 179 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 TSPAN3O60637 253 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 MMP20O60882 483 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 PSIP1O75475 530 aaKnown RBP14.96□□□□□ -0.02
SYNE3-203ENST00000554873 CR2P20023 1033 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 PTBP1P26599 531 aaKnown RBP eCLIP14.96□□□□□ -0.022e-10■■■■■ 35.4
SYNE3-203ENST00000554873 HLA-FP30511 346 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 SLC6A4P31645 630 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 PIK3CGP48736 1102 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 CNIH2Q6PI25 160 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 MILR1Q7Z6M3 343 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 KIAA0907Q7Z7F0 614 aaPredicted RBP14.96□□□□□ -0.02
SYNE3-203ENST00000554873 TMEM132CQ8N3T6 1108 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 PPP3R2Q96LZ3 170 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 COQ10AQ96MF6 247 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 FEVQ99581 238 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 SLC19A3Q9BZV2 496 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 SYNDIG1Q9H7V2 258 aa14.96□□□□□ -0.02
SYNE3-203ENST00000554873 RC3H2Q9HBD1 1191 aaKnown RBP14.96□□□□□ -0.02
SYNE3-203ENST00000554873 DHFRP00374 187 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 SPHARQ15513 63 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 TTLL9Q3SXZ7 439 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 LRIF1Q5T3J3 769 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 CD276Q5ZPR3 534 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 CDC26Q8NHZ8 85 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 PITHD1Q9GZP4 211 aaPredicted RBP14.95□□□□□ -0.02
SYNE3-203ENST00000554873 MAGEH1Q9H213 219 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 ZCCHC4Q9H5U6 513 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 TLR8Q9NR97 1041 aaKnown RBP14.95□□□□□ -0.02
SYNE3-203ENST00000554873 A0A0B4J203 849 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 GLYATL1P3A0A0U1RQE8 302 aa14.95□□□□□ -0.02
SYNE3-203ENST00000554873 F5H5T6 163 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms