RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 C19orf60Q96EN9 201 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 CSF3RQ99062 836 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 MTERF1Q99551 399 aaKnown RBP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 NTMT1Q9BV86 223 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 C1QTNF3Q9BXJ4 246 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 PLA2G3Q9NZ20 509 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 COPG1Q9Y678 874 aaKnown RBP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 DOPEY1Q5JWR5 2465 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 SVILO95425 2214 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CLEC18AA5D8T8 446 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 TCP11X1B4DZS4 312 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 FOXE1O00358 373 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 RTCAO00442 366 aaKnown RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CDK2AP1O14519 115 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 OR7A17O14581 309 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 SBK3P0C264 359 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 TAC1P20366 129 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 GNLYP22749 145 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 PTX3P26022 381 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 HNRNPFP52597 415 aaKnown RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CORO7P57737 925 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CUL3Q13618 768 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 ZRSR2Q15696 482 aaKnown RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 OR4C11Q6IEV9 310 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 FAM180AQ6UWF9 173 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CLEC18BQ6UXF7 455 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 SH2D5Q6ZV89 423 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CRLF3Q8IUI8 442 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 BEST3Q8N1M1 668 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 ZCCHC7Q8N3Z6 543 aaKnown RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 TMEM151AQ8N4L1 468 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CLEC18CQ8NCF0 446 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 TMEM52Q8NDY8 209 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CATSPER1Q8NEC5 780 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 C7orf57Q8NEG2 295 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 B3GNT7Q8NFL0 401 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 OR52B6Q8NGF0 335 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 SUN3Q8TAQ9 357 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 WDR20Q8TBZ3 569 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF483Q8TF39 744 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 APOPT1Q96IL0 206 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 OR51B5Q9H339 312 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 ADAP2Q9NPF8 381 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 MKS1Q9NXB0 559 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 MS4A12Q9NXJ0 267 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 STMN3Q9NZ72 180 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 KCMF1Q9P0J7 381 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 PPIEQ9UNP9 301 aaKnown RBP12.22□□□□□ -0.45
SHMT2-211ENST00000554310 NTNG1Q9Y2I2 539 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 RNF11Q9Y3C5 154 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 CLDN16Q9Y5I7 305 aa12.22□□□□□ -0.45
SHMT2-211ENST00000554310 TGFBR3LH3BV60 316 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 PLPP1O14494 284 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 SNX3O60493 162 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 PRAMEF2O60811 474 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 CTNSO60931 367 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 SH3BGRLO75368 114 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 MYO1DO94832 1006 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 SEMA3DO95025 777 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 OTCP00480 354 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 F10P00742 488 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 GSTA1P08263 222 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 RPS13P62277 151 aaKnown RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 HERVK_113P63132 956 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 ELAVL1Q15717 326 aaKnown RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 FRG2Q64ET8 278 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 FCRLBQ6BAA4 426 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 NUDT13Q86X67 352 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 RNF175Q8N4F7 328 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 FAM26EQ8N5C1 309 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 AMER2Q8N7J2 671 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 BCORP1Q8N888 145 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 ANKS4BQ8N8V4 417 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 NFAM1Q8NET5 270 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 GRHL3Q8TE85 626 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 NSUN5Q96P11 429 aaKnown RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 FRG2BQ96QU4 278 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 MAPKAP1Q9BPZ7 522 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 UTP23Q9BRU9 249 aaKnown RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 ERVK-6Q9BXR3 956 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 ZBTB26Q9HCK0 441 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 SEMA4BQ9NPR2 832 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-211ENST00000554310 TMEM216Q9P0N5 145 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 PHF11Q9UIL8 331 aa12.21□□□□□ -0.45
SHMT2-211ENST00000554310 GABRR3A8MPY1 467 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 CPN2P22792 545 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 ATP5F1P24539 256 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 PPP2R1BP30154 601 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 CLCN2P51788 898 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 TNFRSF17Q02223 184 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 STX4Q12846 297 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 IFT88Q13099 833 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 TUBA3CQ13748 450 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 SERTAD2Q14140 314 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms