RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PHC2Q8IXK0 858 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 UBQLNLQ8IYU4 475 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 LGI2Q8N0V4 545 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 BBS5Q8N3I7 341 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 FBXL16Q8N461 479 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 GCSAMQ8N6F7 178 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 RNF148Q8N7C7 305 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 RASGEF1AQ8N9B8 481 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 FADS6Q8N9I5 356 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 OR4K1Q8NGD4 311 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 OR5R1Q8NH85 324 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 SLCO4A1Q96BD0 722 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 SECISBP2Q96T21 854 aaKnown RBP2.05□□□□□ -2.08
SRP54-204ENST00000553923 PIGQQ9BRB3 760 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 UBAC1Q9BSL1 405 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 TBCDQ9BTW9 1192 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 NTMT1Q9BV86 223 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 FICDQ9BVA6 458 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 GSDMCQ9BYG8 508 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 TSPYL1Q9H0U9 437 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 LRMDAQ9H2I8 198 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 MTIF3Q9H2K0 278 aaKnown RBP2.05□□□□□ -2.08
SRP54-204ENST00000553923 RIMS4Q9H426 269 aaPredicted RBP2.05□□□□□ -2.08
SRP54-204ENST00000553923 RNF121Q9H920 327 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 FGF22Q9HCT0 170 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 TRPC7Q9HCX4 862 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 RPRD1BQ9NQG5 326 aaKnown RBP2.05□□□□□ -2.08
SRP54-204ENST00000553923 GSN-AS1Q9NRJ2 163 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 SERINC1Q9NRX5 453 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 HOMER3Q9NSC5 361 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 B3GAT1Q9P2W7 334 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 CACNG5Q9UF02 275 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 PCSK1NQ9UHG2 260 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 TNNQ9UQP3 1299 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 WDR83OSQ9Y284 106 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 MRPS7Q9Y2R9 242 aaKnown RBP2.05□□□□□ -2.08
SRP54-204ENST00000553923 TTC41PQ6P2S7 1318 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 WDR19Q8NEZ3 1342 aa2.05□□□□□ -2.08
SRP54-204ENST00000553923 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 A0A0U1RQV5 110 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ZCWPW2A0A1B0GU75 182 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 A0A1W2PPK0 400 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 MED19A0JLT2 244 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 MEIOCA2RUB1 952 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 XKRY2A2RUG3 117 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 OR2M5A3KFT3 312 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GOLGA8OA6NCC3 632 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 NCF1BA6NI72 391 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 NCF1CA8MVU1 366 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 E9PQ18 207 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GOLGA8NF8WBI6 632 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 H0Y8G0 127 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ZNF208O43345 1280 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 MED7O43513 233 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GPRIN2O60269 458 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 KIF5CO60282 957 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 OR10H2O60403 315 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ACSL4O60488 711 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CTSVO60911 334 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CSO75390 466 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 SURF6O75683 361 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 ATP6AP2O75787 350 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ZFAND5O76080 213 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 MFN2O95140 757 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 STBD1O95210 358 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 SYNGR4O95473 234 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 NSD2O96028 1365 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 LIPFP07098 398 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ASGR1P07306 291 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 SFTPBP07988 381 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 MMP10P09238 476 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 UQCRFS1P1P0C7P4 283 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ACP2P11117 423 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ZNF23P17027 643 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 UGT1A1P22309 533 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GALP22466 123 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PTPN6P29350 595 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ALDH1B1P30837 517 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PRDX2P32119 198 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 AHRP35869 848 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PTGER3P43115 390 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 NR2C2P49116 596 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PDX1P52945 283 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PRRX1P54821 245 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 NLRP11P59045 1033 aaKnown RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 SSTP61278 116 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 HERV-K104P63124 156 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CCZ1BP86790 482 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CCZ1P86791 482 aaPredicted RBP2.04□□□□□ -2.08
SRP54-204ENST00000553923 CACNG1Q06432 222 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 ZNF415Q09FC8 603 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GAGE2BQ13066 116 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CDH18Q13634 790 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 EFTUD2Q15029 972 aaKnown RBP eCLIP2.04□□□□□ -2.08
SRP54-204ENST00000553923 DUOXA1Q1HG43 343 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 SNAI3Q3KNW1 292 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 CFAP221Q4G0U5 840 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GAGE2EQ4V326 116 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 GPAT3Q53EU6 434 aa2.04□□□□□ -2.08
SRP54-204ENST00000553923 PHLDA2Q53GA4 152 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms