RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KRT81Q14533 505 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 TRIP10Q15642 601 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 EXT1Q16394 746 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 CCDC57Q2TAC2 916 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF311Q5JNZ3 666 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 CAPN13Q6MZZ7 669 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-208ENST00000553278 NIPAL3Q6P499 406 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 ANO5Q75V66 913 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 CDH26Q8IXH8 852 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 FBXL14Q8N1E6 418 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 METTL27Q8N6F8 245 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-208ENST00000553278 TRIM58Q8NG06 486 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 OR56B2PQ8NGI1 322 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 OR52K2Q8NGK3 314 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 OR2T3Q8NH03 318 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 TCP11Q8WWU5 503 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 TMEM37Q8WXS4 190 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 MCHR2Q969V1 340 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 DEFB118Q96PH6 123 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 VPS35Q96QK1 796 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 IL12RB2Q99665 862 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 LPAR4Q99677 370 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 NDUFAF3Q9BU61 184 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 ALG12Q9BV10 488 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 WWP1Q9H0M0 922 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 VCX2Q9H322 139 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 S100A14Q9HCY8 104 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 SLC52A3Q9NQ40 469 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 HACD3Q9P035 362 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 P2RX2Q9UBL9 471 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 CHRNA9Q9UGM1 479 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 ARID2Q68CP9 1835 aa5.17□□□□□ -1.58
SCFD1-208ENST00000553278 SAA2-SAA4A0A096LPE2 208 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 CTAGE15A4D2H0 777 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 SNURFLB1AK76 121 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 GPRIN2O60269 458 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 EML2O95834 649 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 PRKAR1AP10644 381 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 GPX3P22352 226 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 CALB2P22676 271 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 PTPN6P29350 595 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 GDI1P31150 447 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 CHI3L1P36222 383 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-208ENST00000553278 DLSTP36957 453 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 NPY2RP49146 381 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 LBX1P52954 281 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 OR1D5P58170 312 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 DCDC1P59894 354 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 UBE2HP62256 183 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 CDKL1Q00532 357 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 GPR17Q13304 367 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 ZNF528Q3MIS6 628 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 PMF1Q6P1K2 205 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 ZYG11AQ6WRX3 759 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 TUBA1AQ71U36 451 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 GOLGA7Q7Z5G4 137 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 ISCA2Q86U28 154 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 CTAGE6Q86UF2 777 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 TCEANCQ8N8B7 351 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 MLKLQ8NB16 471 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 P3H4Q92791 437 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 TMEM143Q96AN5 459 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 RTP4Q96DX8 246 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 C4orf36Q96KX1 117 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 SENP8Q96LD8 212 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 ERGIC2Q96RQ1 377 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 KRT12Q99456 494 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 TUBA1CQ9BQE3 449 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 JPH2Q9BR39 696 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-208ENST00000553278 POMT2Q9UKY4 750 aa5.16□□□□□ -1.58
SCFD1-208ENST00000553278 TRBV4-1A0A0J9YWV2 114 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 E9PMD0 336 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 SGK494L7N484 410 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 EXTL3O43909 919 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 SAP30O75446 220 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 ADCY5O95622 1261 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 CSF2P04141 144 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 ACAA1P09110 424 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-208ENST00000553278 CD38P28907 300 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 DUSP5Q16690 384 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 TATDN3Q17R31 274 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 ZSWIM7Q19AV6 140 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 CBLN3Q6UW01 205 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 TAS2R42Q7RTR8 314 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 SRRM1Q8IYB3 904 aaKnown RBP5.15□□□□□ -1.59
SCFD1-208ENST00000553278 KIRREL3Q8IZU9 778 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 CNBD1Q8NA66 436 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 KBTBD8Q8NFY9 601 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 GOLGA5Q8TBA6 731 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 CD99L2Q8TCZ2 262 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 SMPDL3AQ92484 453 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 HMCESQ96FZ2 354 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 PSKH2Q96QS6 385 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 TBCDQ9BTW9 1192 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 EDEM2Q9BV94 578 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 CAPS2Q9BXY5 557 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 GCOM2Q9BZD3 368 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-208ENST00000553278 GDF3Q9NR23 364 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 RBM28Q9NW13 759 aaKnown RBP5.15□□□□□ -1.59
SCFD1-208ENST00000553278 TECRQ9NZ01 308 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms