RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 F7P08709 466 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 STSP08842 583 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PRKAR1AP10644 381 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 MTHFD2P13995 350 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 HGFP14210 728 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 JUPP14923 745 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 UGT2B7P16662 529 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PTPN3P26045 913 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 APEX1P27695 318 aaKnown RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 GPX4P36969 197 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NNMTP40261 264 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ACTR1BP42025 376 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CAPZA2P47755 286 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 EVX1P49640 407 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 VEGFCP49767 419 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 GMPSP49915 693 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 GTF2A2P52657 109 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ARFIP1P53367 373 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FOXA1P55317 472 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ITGA1P56199 1179 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 STARD6P59095 220 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ACTR1AP61163 376 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PURAQ00577 322 aaKnown RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 DSC2Q02487 901 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CSTF1Q05048 431 aaKnown RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 RPA4Q13156 261 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PRKG2Q13237 762 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 DMP1Q13316 513 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ILKQ13418 452 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FGFBP1Q14512 234 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 OPCMLQ14982 345 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 UGCGQ16739 394 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 TSTQ16762 297 aaKnown RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM83EQ2M2I3 478 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 TTLL9Q3SXZ7 439 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 TRIM60Q495X7 471 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SV2CQ496J9 727 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SPIN4Q56A73 249 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 HACD4Q5VWC8 232 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM219BQ5XKK7 198 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 BICRALQ6AI39 1079 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NADSYN1Q6IA69 706 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SLFN12LQ6IEE8 588 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 OR2T5Q6IEZ7 315 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC25A25Q6KCM7 469 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ZC3H14Q6PJT7 736 aaKnown RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ZER1Q7Z7L7 766 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ADGRD2Q7Z7M1 963 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ISCA2Q86U28 154 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 IFNEQ86WN2 208 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 MIB1Q86YT6 1006 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NAXDQ8IW45 347 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 KLHL36Q8N4N3 616 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 LRRC17Q8N6Y2 441 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 EFHBQ8N7U6 833 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 BMPERQ8N8U9 685 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ATG16L2Q8NAA4 619 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 OR2T12Q8NG77 320 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 OR2T29Q8NH02 315 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NANPQ8TBE9 248 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 TMEM163Q8TC26 289 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 GLYATL2Q8WU03 294 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CHURC1Q8WUH1 139 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ORAI1Q96D31 301 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 COQ10AQ96MF6 247 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 VAT1Q99536 393 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ZBTB18Q99592 522 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC38A3Q99624 504 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CPPED1Q9BRF8 314 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ADPGKQ9BRR6 497 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 C1QTNF6Q9BXI9 259 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ELOVL4Q9GZR5 314 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ALX4Q9H161 411 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FN3KQ9H479 309 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 RIBC2Q9H4K1 309 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 IKZF5Q9H5V7 419 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 RNF122Q9H9V4 155 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC25A19Q9HC21 320 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SPON1Q9HCB6 807 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PRDM7Q9NQW5 492 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 TREX1Q9NSU2 369 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 SPATA6Q9NWH7 488 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NDUFB11Q9NX14 153 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PIPOXQ9P0Z9 390 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 MYEF2Q9P2K5 600 aaKnown RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 EVLQ9UI08 416 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 BTNL2Q9UIR0 455 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FBXL21Q9UKT6 434 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF490Q9ULM2 529 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 NCKAP1Q9Y2A7 1128 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CLCA3PQ9Y6N3 262 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 AP1M2Q9Y6Q5 423 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 AHDC1Q5TGY3 1603 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 STRCP1A6NGW2 1772 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 DICER1Q9UPY3 1922 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TRAV19A0A0A6YYK7 116 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM240BA0A1B0GVZ2 78 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms