RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CLDN4O14493 209 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 UGDHO60701 494 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ITGA10O75578 1167 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ABHD2P08910 425 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 CD46P15529 392 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 EEF1DP29692 281 aaKnown RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 SERPINB1P30740 379 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 HPDP32754 393 aaPredicted RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 DCTP40126 519 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 CA7P43166 264 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 SSR2P43308 183 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 SERPINB9P50453 376 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 CLCN2P51788 898 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 NEK2P51955 445 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 OR4C11Q6IEV9 310 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 OR4N5Q8IXE1 308 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 SRFBP1Q8NEF9 429 aaKnown RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 PHF21BQ96EK2 531 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 GPR137Q96N19 417 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 DEPPQ9NTK1 212 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF225Q9UK10 706 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 FBXW2Q9UKT8 454 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 MRPS33Q9Y291 106 aaKnown RBP12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ASB4Q9Y574 426 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 PCDHGA11Q9Y5H2 935 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 FBN2P35556 2912 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 PINLYPA6NC86 204 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 CDK2AP1O14519 115 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 STX16O14662 325 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 IGKV3-11P04433 115 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 CYB561P49447 251 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 HK2P52789 917 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 HSF1Q00613 529 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 TNFRSF17Q02223 184 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 TGM3Q08188 693 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 SLAMF1Q13291 335 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 C3AR1Q16581 482 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 MAPKAPK3Q16644 382 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 AP5B1Q2VPB7 878 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 METTL2BQ6P1Q9 378 aaKnown RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 Q6ZPB1 254 aaPredicted RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 CEP128Q6ZU80 1094 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 CHSY3Q70JA7 882 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 MYLK4Q86YV6 388 aaPredicted RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 GSPT2Q8IYD1 628 aaKnown RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 TMEM132CQ8N3T6 1108 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 SLC2A12Q8TD20 617 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 DOK4Q8TEW6 326 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF721Q8TF20 911 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 MZB1Q8WU39 189 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 ITLN2Q8WWU7 325 aaPredicted RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 RGMAQ96B86 450 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 ROGDIQ9GZN7 287 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 TSPYL1Q9H0U9 437 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 NOL11Q9H8H0 719 aaKnown RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 DDX31Q9H8H2 851 aaKnown RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 PPT2Q9UMR5 302 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 ANGPTL3Q9Y5C1 460 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 LRBAP50851 2863 aa12.1□□□□□ -0.47
NPAS3-209ENST00000551008 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
NPAS3-209ENST00000551008 A0A087WUV0 522 aaPredicted RBP12.09□□□□□ -0.47
NPAS3-209ENST00000551008 A0A1B0GUH1 482 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 A0A1W2PR48 441 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 A8MT66 165 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 NPIPA5E9PKD4 350 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 RIPK2O43353 540 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 PROM1O43490 865 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 SLC19A2O60779 497 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 OR2J2O76002 312 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 ZFAND5O76080 213 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 OR6B1O95007 311 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 CLPSP04118 112 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 IFNA16P05015 189 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 MYBL2P10244 700 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 COL6A2P12110 1019 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 CPN2P22792 545 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 RFC3P40938 356 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 SOX3P41225 446 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 MEOX1P50221 254 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 ADORA2A-AS1P86434 159 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 ALDH6A1Q02252 535 aaKnown RBP12.09□□□□□ -0.47
NPAS3-209ENST00000551008 FOLH1Q04609 750 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 CUL3Q13618 768 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 CDSNQ15517 529 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 LETMD1Q6P1Q0 360 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 KLC3Q6P597 504 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 NCCRP1Q6ZVX7 275 aaPredicted RBP12.09□□□□□ -0.47
NPAS3-209ENST00000551008 SULF2Q8IWU5 870 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 CYP4Z2PQ8N1L4 340 aa12.09□□□□□ -0.47
NPAS3-209ENST00000551008 MORN4Q8NDC4 146 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms