RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	BSCL2	Q96G97	398 aa	Predicted RBP	3.22	□□□□□ -1.89
CNOT2-222	ENST00000550155	SDHC	Q99643	169 aa	Predicted RBP	3.22	□□□□□ -1.89
CNOT2-222	ENST00000550155	LMAN1L	Q9HAT1	526 aa		3.22	□□□□□ -1.89
CNOT2-222	ENST00000550155	VNN3	Q9NY84	501 aa		3.22	□□□□□ -1.89
CNOT2-222	ENST00000550155	ZNF319	Q9P2F9	582 aa		3.22	□□□□□ -1.89
CNOT2-222	ENST00000550155	ANAPC5	Q9UJX4	755 aa		3.22	□□□□□ -1.89
CNOT2-222	ENST00000550155	HTR3E	A5X5Y0	456 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	ZNF724	A8MTY0	619 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	CCER2	I3L3R5	266 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	KRT6A	P02538	564 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	KRT6B	P04259	564 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	FAS	P25445	335 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	KRT20	P35900	424 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	ID1	P41134	155 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	KRT6C	P48668	564 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	FHIT	P49789	147 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	TWISTNB	Q3B726	338 aa	Predicted RBP	3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	C1orf141	Q5JVX7	400 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	CGB2	Q6NT52	195 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	ZNF730	Q6ZMV8	503 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	CREBRF	Q8IUR6	639 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	CCDC71	Q8IV32	467 aa	Predicted RBP	3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	GPR148	Q8TDV2	347 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	TCP11	Q8WWU5	503 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	SIPA1	Q96FS4	1042 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	AMBN	Q9NP70	447 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	ABCC13	Q9NSE7	274 aa		3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	TDRD6	O60522	2096 aa	Known RBP	3.21	□□□□□ -1.9
CNOT2-222	ENST00000550155	PFAS	O15067	1338 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	ARHGEF37	A1IGU5	675 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	ILVBL	A1L0T0	632 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	CCS	O14618	274 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	MCF2L	O15068	1137 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	FIBP	O43427	364 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	CALCA	P01258	141 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	TSPY3	P0CV98	308 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	TSPY8	P0CW00	308 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	OR3A1	P47881	315 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	NPY4R	P50391	375 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	PRKCE	Q02156	737 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	CACUL1	Q86Y37	369 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	TDH	Q8IZJ6	230 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	ARL14	Q8N4G2	192 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	CCDC191	Q8NCU4	936 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	OR10A4	Q9H209	315 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	DPEP3	Q9H4B8	488 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	MINDY3	Q9H8M7	445 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	NRBP1	Q9UHY1	535 aa		3.2	□□□□□ -1.9
CNOT2-222	ENST00000550155	FAM170A	A1A519	330 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	C5orf52	A6NGY3	159 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	RNF212B	A8MTL3	300 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155		M0R296	226 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	OR6A2	O95222	327 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	PRB2	P02812	416 aa	Predicted RBP	3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	FH	P07954	510 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	FAM58BP	P0C7Q3	252 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	CALML3	P27482	149 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	GDF1	P27539	372 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	PRKAR2B	P31323	418 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	TIA1	P31483	386 aa	Known RBP eCLIP	3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	SOAT1	P35610	550 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	HMGCL	P35914	325 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	MDH2	P40926	338 aa	Known RBP	3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	SLC25A1	P53007	311 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	TOMM20	Q15388	145 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	C17orf58	Q2M2W7	97 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	KRT77	Q7Z794	578 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	SETD6	Q8TBK2	473 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	SGF29	Q96ES7	293 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	MAGEB18	Q96M61	343 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	PAXX	Q9BUH6	204 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	RNF24	Q9Y225	148 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	NTNG1	Q9Y2I2	539 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	TMED7	Q9Y3B3	224 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	ETV7	Q9Y603	341 aa		3.19	□□□□□ -1.9
CNOT2-222	ENST00000550155	ANKDD1B	A6NHY2	528 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	DUSP11	O75319	330 aa	Known RBP	3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	APBB3	O95704	486 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	FCGR3A	P08637	254 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	PGAM2	P15259	253 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	ZNF41	P51814	821 aa	Predicted RBP	3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	NUCB1	Q02818	461 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	FOLH1	Q04609	750 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	CASC4	Q6P4E1	433 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	LSMEM1	Q8N8F7	131 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	ICA1L	Q8NDH6	482 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	GANC	Q8TET4	914 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	CKAP2	Q8WWK9	683 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	EXOC4	Q96A65	974 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	ERP27	Q96DN0	273 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	NUS1	Q96E22	293 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	C16orf58	Q96GQ5	468 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	ERGIC2	Q96RQ1	377 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	C17orf62	Q9BQA9	187 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	IDI2	Q9BXS1	227 aa		3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	NOL7	Q9UMY1	257 aa	Known RBP	3.18	□□□□□ -1.9
CNOT2-222	ENST00000550155	KBTBD13	C9JR72	458 aa		3.17	□□□□□ -1.9
CNOT2-222	ENST00000550155	LETM1	O95202	739 aa	Predicted RBP	3.17	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms