RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 QPCTLQ9NXS2 382 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CRIM1Q9NZV1 1036 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 ATG4BQ9Y4P1 393 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 FREM3P0C091 2139 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 NCKAP5O14513 1909 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A0G2JN53 185 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ANKDD1BA6NHY2 528 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 A6NNC1 897 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 AHRRA9YTQ3 701 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 G3V3Y1 287 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 CDC7O00311 574 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 NRDCO43847 1150 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 EPPINO95925 133 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 CELA3AP09093 270 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 TNNI3P19429 210 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ENDOUP21128 410 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 CEACAM8P31997 349 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 GGT5P36269 586 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC6A12P48065 614 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 DNASE1L1P49184 302 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 PLA2G16P53816 162 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 MTTPP55157 894 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 STX4Q12846 297 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 BIKQ13323 160 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 FLYWCH1Q4VC44 716 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC22A10Q63ZE4 541 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 TRIM40Q6P9F5 258 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ABHD17CQ6PCB6 329 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SEM1Q6ZVN7 128 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 WDR53Q7Z5U6 358 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 IGDCC3Q8IVU1 814 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.09□□□□□ -0.952e-7■■■■■ 102.3
TRAFD1-207ENST00000550051 KRT78Q8N1N4 520 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 NKAPQ8N5F7 415 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC15A4Q8N697 577 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF321PQ8N8H1 164 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM47BQ8NA70 645 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SPC24Q8NBT2 197 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF721Q8TF20 911 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 RNASE6Q93091 150 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 LRRC46Q96FV0 321 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 PBKQ96KB5 322 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SH3GL2Q99962 352 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 REXO4Q9GZR2 422 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 EHD1Q9H4M9 534 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 PLAC1Q9HBJ0 212 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 LYRM4Q9HD34 91 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SEMA4BQ9NPR2 832 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ALKBH4Q9NXW9 302 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 TUBA8Q9NY65 449 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 GPRC5BQ9NZH0 403 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SPRR3Q9UBC9 169 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF629Q9UEG4 869 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 FOXD3Q9UJU5 478 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF490Q9ULM2 529 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 PLEKHA6Q9Y2H5 1048 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 OARD1Q9Y530 152 aa9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A1B0GTL3 188 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 C17orf105B2RV13 164 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 CCL3P10147 92 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 DRD2P14416 443 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 ZNF37AP17032 561 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 HOXC12P31275 282 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 TIMP3P35625 211 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 GDF5P43026 501 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 DGKQP52824 942 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 FRG1Q14331 258 aaKnown RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 SLBPQ14493 270 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 MSS51Q4VC12 460 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 CDKL4Q5MAI5 379 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 POMZP3Q6PJE2 187 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 VN1R5Q7Z5H4 357 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 CLNKQ7Z7G1 428 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 BIVMQ86UB2 503 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 ULK2Q8IYT8 1036 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 DND1Q8IYX4 353 aaKnown RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 LRRC25Q8N386 305 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 FBXW8Q8N3Y1 598 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 RELL2Q8NC24 303 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 NUBPLQ8TB37 319 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 SLC2A12Q8TD20 617 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 PAQR8Q8TEZ7 354 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 GRK7Q8WTQ7 553 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 ANKRD9Q96BM1 317 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 RHBDF1Q96CC6 855 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 WDR34Q96EX3 536 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 SENP5Q96HI0 755 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 MS4A14Q96JA4 679 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 CSF3RQ99062 836 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 NAP1L3Q99457 506 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 OR8D2Q9GZM6 311 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 PROK2Q9HC23 129 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 CNIH4Q9P003 139 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 CBLCQ9ULV8 474 aa9.08□□□□□ -0.96
TRAFD1-207ENST00000550051 DVL2O14641 736 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 PRAMEF4O60810 478 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 WDR47O94967 919 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms