RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PHF10Q8WUB8 498 aaKnown RBP10.59□□□□□ -0.71
LINC00661-204ENST00000549354 GLYATL1Q969I3 302 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 TMEM159Q96B96 161 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 CCM2Q9BSQ5 444 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 DUSP26Q9BV47 211 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 HDAC8Q9BY41 377 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 TIGARQ9NQ88 270 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 SPATA7Q9P0W8 599 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 OSGIN1Q9UJX0 560 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 NAALAD2Q9Y3Q0 740 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 UGT2A1Q9Y4X1 527 aa10.59□□□□□ -0.71
LINC00661-204ENST00000549354 TRANK1O15050 2925 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 GSAPA4D1B5 854 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 GABRR3A8MPY1 467 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 WNT9AO14904 365 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PPM1DO15297 605 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PRKRAO75569 313 aaKnown RBP10.58□□□□□ -0.72
LINC00661-204ENST00000549354 CH25HO95992 272 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SOD1P00441 154 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 GSTM1P09488 218 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 ITGAMP11215 1152 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 IFITM2Q01629 132 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 MLLT1Q03111 559 aaPredicted RBP10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SMU1Q2TAY7 513 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 CPTPQ5TA50 214 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF605Q86T29 641 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 RBM45Q8IUH3 476 aaKnown RBP10.58□□□□□ -0.72
LINC00661-204ENST00000549354 ZZZ3Q8IYH5 903 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 OSGEPL1Q9H4B0 414 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SLC28A3Q9HAS3 691 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 EQTNQ9NQ60 294 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SH2B3Q9UQQ2 575 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TMEM98Q9Y2Y6 226 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SNX11Q9Y5W9 270 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TAF4O00268 1085 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 FRS3O43559 492 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 KIAA0513O60268 411 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 ELFN1P0C7U0 828 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 HOXC5Q00444 222 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 C2orf80Q0P641 193 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF284Q2VY69 593 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 BCL7AQ4VC05 210 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TMEM220Q6QAJ8 160 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PAQR6Q6TCH4 344 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TRIM46Q7Z4K8 759 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SFTPA1Q8IWL2 248 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 KLHDC8AQ8IYD2 350 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SLC34A3Q8N130 599 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 NACC2Q96BF6 587 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 MYADMQ96S97 322 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 SNTG1Q9NSN8 517 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TRPC4Q9UBN4 977 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 DOCK8Q8NF50 2099 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 K7ESM1 405 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PRLHRP49683 370 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 HNMTP50135 292 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PROX2Q3B8N5 592 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 NRARPQ7Z6K4 114 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 WDR48Q8TAF3 677 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 UCN3Q969E3 161 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 EXOSC8Q96B26 276 aaKnown RBP10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PPP1R16AQ96I34 528 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PSD2Q9BQI7 771 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 IGFLR1Q9H665 355 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 PLSCR3Q9NRY6 295 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 CLEC1BQ9P126 229 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TRPS1Q9UHF7 1281 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 CLEC4AQ9UMR7 237 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TMED5Q9Y3A6 229 aa10.58□□□□□ -0.72
LINC00661-204ENST00000549354 TCF20Q9UGU0 1960 aaKnown RBP10.58□□□□□ -0.72
LINC00661-204ENST00000549354 METTL15A6NJ78 407 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 IDH3BO43837 385 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 SNX4O95219 450 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 MED26O95402 600 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 ADRA2AP08913 450 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 C8orf89P0DMQ9 161 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 ADRB3P13945 408 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 PIK3CBP42338 1070 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 CASP3P42574 277 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 SLC6A12P48065 614 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 DOC2BQ14184 412 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 EXOC3L2Q2M3D2 409 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 SPDYE7PQ495Y7 208 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 RNASE12Q5GAN4 147 aaKnown RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 CLEC12AQ5QGZ9 265 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 TRIM48Q8IWZ4 208 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 LGI4Q8N135 537 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 RASGEF1AQ8N9B8 481 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 OR10G2Q8NGC3 310 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 WDR36Q8NI36 951 aaKnown RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 RAB7BQ96AH8 199 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF486Q96H40 463 aaPredicted RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 TTTY10Q9BZA0 68 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 OR2AG1Q9H205 316 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 MMP28Q9H239 520 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 PRSS16Q9NQE7 514 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 DNAJC11Q9NVH1 559 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 VPS29Q9UBQ0 182 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms