RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TP53I13Q8NBR0 393 aaPredicted RBP22.06■■□□□ 1.12
NPAS3-206ENST00000548645 OVCA2Q8WZ82 227 aa22.06■■□□□ 1.12
NPAS3-206ENST00000548645 SAMD11Q96NU1 681 aa22.06■■□□□ 1.12
NPAS3-206ENST00000548645 MGAT4BQ9UQ53 548 aa22.06■■□□□ 1.12
NPAS3-206ENST00000548645 TRBV4-1A0A0J9YWV2 114 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 H3BN98 237 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 SOX14O95416 240 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 SRPRAP08240 638 aaKnown RBP22.05■■□□□ 1.12
NPAS3-206ENST00000548645 ARAFP10398 606 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 SLC2A2P11168 524 aaPredicted RBP22.05■■□□□ 1.12
NPAS3-206ENST00000548645 CPEP16870 476 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 M6PRP20645 277 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 SDC2P34741 201 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 ZNF628Q5EBL2 1059 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 ARMCX6Q7L4S7 300 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 DUSP18Q8NEJ0 188 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 SLC6A18Q96N87 628 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 PKP4Q99569 1192 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 ZNF717Q9BY31 904 aaPredicted RBP22.05■■□□□ 1.12
NPAS3-206ENST00000548645 HLA-DQB1P01920 261 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 PRKAR1AP10644 381 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 XKP51811 444 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 CDH18Q13634 790 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 HEPACAMQ14CZ8 416 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 OCLNQ16625 522 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 TMEM203Q969S6 136 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 LYSMD1Q96S90 227 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 TRIM45Q9H8W5 580 aaPredicted RBP22.05■■□□□ 1.12
NPAS3-206ENST00000548645 RC3H2Q9HBD1 1191 aaKnown RBP22.05■■□□□ 1.12
NPAS3-206ENST00000548645 TEKT2Q9UIF3 430 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 MBD1Q9UIS9 605 aaPredicted RBP22.05■■□□□ 1.12
NPAS3-206ENST00000548645 TMPRSS11EQ9UL52 423 aa22.05■■□□□ 1.12
NPAS3-206ENST00000548645 KPNA5O15131 536 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 ADNP2Q6IQ32 1131 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 TCEANCQ8N8B7 351 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 ALG14Q96F25 216 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 GPBP1L1Q9HC44 474 aaPredicted RBP22.04■■□□□ 1.12
NPAS3-206ENST00000548645 ATP13A2Q9NQ11 1180 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 HCN2Q9UL51 889 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 MAN2A2P49641 1150 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 PPP3R1P63098 170 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 SLC5A12Q1EHB4 618 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 TPRG1Q6ZUI0 275 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 SLC30A8Q8IWU4 369 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 OR7G3Q8NG95 312 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 HUS1BQ8NHY5 278 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 WRAP53Q9BUR4 548 aaKnown RBP22.04■■□□□ 1.12
NPAS3-206ENST00000548645 C2orf49Q9BVC5 232 aaPredicted RBP22.04■■□□□ 1.12
NPAS3-206ENST00000548645 RERGLQ9H628 205 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 GULP1Q9UBP9 304 aa22.04■■□□□ 1.12
NPAS3-206ENST00000548645 DIMT1Q9UNQ2 313 aaKnown RBP22.04■■□□□ 1.12
NPAS3-206ENST00000548645 AGRPO00253 132 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 AKR7A2O43488 359 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 ZNF8P17098 575 aaPredicted RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 SERPINA4P29622 427 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 CSNK1DP48730 415 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 WDR5P61964 334 aaKnown RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 ZNF763Q0D2J5 394 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 LAPTM4BQ86VI4 370 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 Q8N402 240 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 SPIN1Q9Y657 262 aaPredicted RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 FAM240BA0A1B0GVZ2 78 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 FFAR1O14842 300 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 GPR37L1O60883 481 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 IGFBP1P08833 259 aaPredicted RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 IRS1P35568 1242 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 NAE1Q13564 534 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 ESCO2Q56NI9 601 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 SPERTQ8NA61 448 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 OR5AK3PQ8NH89 298 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 MED8Q96G25 268 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 PCDHB7Q9Y5E2 793 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 PCDHGB7Q9Y5F8 929 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 H7C4K7 107 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 RECKO95980 971 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 ATP1B2P14415 290 aaPredicted RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 APEX1P27695 318 aaKnown RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 SNRPD2P62316 118 aaKnown RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 MADCAM1Q13477 382 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 ZNF730Q6ZMV8 503 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 TRPV1Q8NER1 839 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 PPCDCQ96CD2 204 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 KATNB1Q9BVA0 655 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 KLF16Q9BXK1 252 aaPredicted RBP22.03■■□□□ 1.12
NPAS3-206ENST00000548645 BRD9Q9H8M2 597 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 TRPM5Q9NZQ8 1165 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 HSPB11Q9Y547 144 aa22.03■■□□□ 1.12
NPAS3-206ENST00000548645 OR10H3O60404 316 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 RAB36O95755 333 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 LIM2P55344 173 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 MAB21L1Q13394 359 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 PLK5Q496M5 336 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 RTP2Q5QGT7 225 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 DCST1Q5T197 706 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 BCDIN3DQ7Z5W3 292 aaKnown RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 ZNF557Q8N988 423 aaPredicted RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 OR4M1Q8NGD0 313 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 C1GALT1C1Q96EU7 318 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 COQ7Q99807 217 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms