RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ASPGQ86U10 573 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 RETREG3Q86VR2 466 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 RIMKLAQ8IXN7 391 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 KCT2Q8NC54 265 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 SLC13A3Q8WWT9 602 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 VPS33AQ96AX1 596 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 EGLN2Q96KS0 407 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 SLC22A11Q9NSA0 550 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 LEF1Q9UJU2 399 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-227ENST00000548080 A0A1B0GX78 115 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 EEDO75530 441 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 LRATO95237 230 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 B3GALT4O96024 378 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 IL6P05231 212 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 PGM1P36871 562 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 DGKQP52824 942 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ARFIP1P53367 373 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ARSFP54793 590 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 TMPRSS3P57727 454 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 HYAL2Q12891 473 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 PWP1Q13610 501 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 TIGD2Q4W5G0 525 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 HACD2Q6Y1H2 254 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 UBE3DQ7Z6J8 389 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 DEFB107AQ8IZN7 70 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 SHISA5Q8N114 240 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ARHGAP24Q8N264 748 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 NT5CQ8TCD5 201 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 C16orf78Q8WTQ4 265 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 NUDT8Q8WV74 236 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 STARD8Q92502 1023 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 UTP4Q969X6 686 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 MCUR1Q96AQ8 359 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 TESCQ96BS2 214 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 TM4SF19Q96DZ7 209 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 LRFN5Q96NI6 719 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 SORBS1Q9BX66 1292 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 REXO4Q9GZR2 422 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 AICDAQ9GZX7 198 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ADAM29Q9UKF5 820 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 MGAQ8IWI9 3026 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 A0A0A6YYC8 382 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 I3L1I5 382 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 RTCAO00442 366 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 NKX2-8O15522 239 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 AKAP10O43572 662 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 CNOT3O75175 753 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 GBAP04062 536 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 TPP2P29144 1249 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 STXBP1P61764 594 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 DCDP81605 110 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 RGS1Q08116 209 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ZNF763Q0D2J5 394 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 FAM174BQ3ZCQ3 159 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 NKAIN1Q4KMZ8 207 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 TOR1AIP1Q5JTV8 583 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 CCNYL2Q5T2Q4 361 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 OR4C11Q6IEV9 310 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ZNF517Q6ZMY9 492 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 RIPOR1Q6ZS17 1223 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 PGAM4Q8N0Y7 254 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ARHGEF39Q8N4T4 335 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 SRFBP1Q8NEF9 429 aaKnown RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 CDC26Q8NHZ8 85 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ROPN1LQ96C74 230 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 MS4A6EQ96DS6 147 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 THTPAQ9BU02 230 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ZNF717Q9BY31 904 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 SLC6A16Q9GZN6 736 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 MMADHCQ9H3L0 296 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 KLHL31Q9H511 634 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 WDR41Q9HAD4 459 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 GID8Q9NWU2 228 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 MAP10Q9P2G4 905 aa16.42■□□□□ 0.22
HDAC7-227ENST00000548080 IFT80Q9P2H3 777 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-227ENST00000548080 ARHGAP10A1A4S6 786 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 ASPDHA6ND91 283 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 KLHL18O94889 574 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 IL1RNP18510 177 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 AGXTP21549 392 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 S100A3P33764 101 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 SRSF11Q05519 484 aaKnown RBP16.41■□□□□ 0.22
HDAC7-227ENST00000548080 TGM3Q08188 693 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 VAC14Q08AM6 782 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 DPY19L1Q2PZI1 675 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 MUM1Q2TAK8 710 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 FAM214AQ32MH5 1076 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 SPANXN4Q5MJ08 99 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 SHISA6Q6ZSJ9 500 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 COX15Q7KZN9 410 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 NUDT13Q86X67 352 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 CAMKVQ8NCB2 501 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 OR2L5Q8NG80 312 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC7-227ENST00000548080 GFM2Q969S9 779 aaKnown RBP16.41■□□□□ 0.22
HDAC7-227ENST00000548080 DDX31Q9H8H2 851 aaKnown RBP16.41■□□□□ 0.22
HDAC7-227ENST00000548080 MYNNQ9NPC7 610 aa16.41■□□□□ 0.22
HDAC7-227ENST00000548080 WBP11Q9Y2W2 641 aaKnown RBP16.41■□□□□ 0.22
HDAC7-227ENST00000548080 C9J4A7 227 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms