RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PAFAH1B1P43034 410 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 RNF4P78317 190 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 DDX39BQ13838 428 aaKnown RBP18.86■□□□□ 0.61
SSH1-207ENST00000547862 SLMAPQ14BN4 828 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 HIST2H2ACQ16777 129 aaPredicted RBP18.86■□□□□ 0.61
SSH1-207ENST00000547862 HIST2H2AA3Q6FI13 130 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 OR4N5Q8IXE1 308 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 RNF175Q8N4F7 328 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 TMEM251Q8N6I4 163 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 PDPRQ8NCN5 879 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 DOK4Q8TEW6 326 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 GPR22Q99680 433 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 FAM173AQ9BQD7 235 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 ALG9Q9H6U8 611 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 EXO5Q9H790 373 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 VTI1BQ9UEU0 232 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 SAR1BQ9Y6B6 198 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 ARHGAP21Q5T5U3 1957 aa18.86■□□□□ 0.61
SSH1-207ENST00000547862 SYNDIG1LA6NDD5 238 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 ZNF354AO60765 605 aaPredicted RBP18.85■□□□□ 0.61
SSH1-207ENST00000547862 ETHE1O95571 254 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 TGFB1P01137 390 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 P04436 131 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 CELA3AP09093 270 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 EPORP19235 508 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 GGT5P36269 586 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 ATP6V0D1P61421 351 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 ASPHQ12797 758 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 LAPTM5Q13571 262 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 SERTAD2Q14140 314 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 LRRC70Q7Z2Q7 622 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 UBE3DQ7Z6J8 389 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 MYLK4Q86YV6 388 aaPredicted RBP18.85■□□□□ 0.61
SSH1-207ENST00000547862 ACOT4Q8N9L9 421 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 ACBD4Q8NC06 268 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 LILRB4Q8NHJ6 448 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 DGAT2Q96PD7 388 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 CPNE1Q99829 537 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 PHACTR1Q9C0D0 580 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 ROGDIQ9GZN7 287 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 LDAHQ9H6V9 325 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 ZDHHC11Q9H8X9 412 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 LYRM4Q9HD34 91 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 SACM1LQ9NTJ5 587 aa18.85■□□□□ 0.61
SSH1-207ENST00000547862 TUBA8Q9NY65 449 aaPredicted RBP18.85■□□□□ 0.61
SSH1-207ENST00000547862 FIGNL2A6NMB9 653 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 FGF17O60258 216 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 TOXO94900 526 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 COX7A2P14406 83 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 CNR1P21554 472 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 ATP5A1P25705 553 aaKnown RBP18.84■□□□□ 0.61
SSH1-207ENST00000547862 MSX1P28360 303 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 GP5P40197 560 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 RAB10P61026 200 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 TFF3Q07654 80 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 CALCOCO2Q13137 446 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 MYBPHQ13203 477 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 AP5B1Q2VPB7 878 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 GXYLT1Q4G148 440 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 NDUFAF5Q5TEU4 345 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 ACAD11Q709F0 780 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 RAPH1Q70E73 1250 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 CMC1Q7Z7K0 106 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 FAM109AQ8N4B1 249 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 ZNF473Q8WTR7 871 aaKnown RBP18.84■□□□□ 0.61
SSH1-207ENST00000547862 KIAA1191Q96A73 305 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 WDR34Q96EX3 536 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 TREX2Q9BQ50 279 aaPredicted RBP18.84■□□□□ 0.61
SSH1-207ENST00000547862 ZNF559Q9BR84 538 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 TBCDQ9BTW9 1192 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 OR51B5Q9H339 312 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 ALKBH4Q9NXW9 302 aa18.84■□□□□ 0.61
SSH1-207ENST00000547862 PTBP2Q9UKA9 531 aaKnown RBP18.84■□□□□ 0.61
SSH1-207ENST00000547862 TCRBV9S1A1TA0A576 114 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 UBXN8O00124 270 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 PRKRAO75569 313 aaKnown RBP18.83■□□□□ 0.6
SSH1-207ENST00000547862 FAM155BO75949 473 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 GLSO94925 669 aaPredicted RBP18.83■□□□□ 0.6
SSH1-207ENST00000547862 LRATO95237 230 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 IGFBP2P18065 325 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 HIST1H1TP22492 207 aaPredicted RBP18.83■□□□□ 0.6
SSH1-207ENST00000547862 ACVR2AP27037 513 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 PIGAP37287 484 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 RAP1GDS1P52306 607 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 PRAMEF20Q5VT98 475 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 MED27Q6P2C8 311 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 OPN5Q6U736 354 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 RGS9BPQ6ZS82 235 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 TRILQ7L0X0 811 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 SRFBP1Q8NEF9 429 aaKnown RBP18.83■□□□□ 0.6
SSH1-207ENST00000547862 OR5L2Q8NGL0 311 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 ZNF721Q8TF20 911 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 ANKRD9Q96BM1 317 aaPredicted RBP18.83■□□□□ 0.6
SSH1-207ENST00000547862 GAL3ST4Q96RP7 486 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 CD244Q9BZW8 370 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 IL1RL2Q9HB29 575 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 SEMA4BQ9NPR2 832 aaPredicted RBP18.83■□□□□ 0.6
SSH1-207ENST00000547862 NUDT4Q9NZJ9 180 aa18.83■□□□□ 0.6
SSH1-207ENST00000547862 OPTCQ9UBM4 332 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms