RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 FOLR3P41439 243 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 ARCN1P48444 511 aaKnown RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 SERPINB9P50453 376 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 NEK2P51955 445 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 ARL4CP56559 192 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 RAC3P60763 192 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 PMP22Q01453 160 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 FOLH1Q04609 750 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 PLP2Q04941 152 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 NSUN2Q08J23 767 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 SLC10A7Q0GE19 358 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 MFAP5Q13361 173 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 APOFQ13790 326 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 DPYSQ14117 519 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 RNF151Q2KHN1 245 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 ZNF829Q3KNS6 432 aaPredicted RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 PGM2L1Q6PCE3 622 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 CLEC9AQ6UXN8 241 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 Q6ZPB1 254 aaPredicted RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 LHFPL2Q6ZUX7 228 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 FAM47EQ6ZV65 393 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 CYS1Q717R9 158 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 C11orf96Q7Z7L8 435 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 CRLF3Q8IUI8 442 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 CHERPQ8IWX8 916 aaKnown RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 FAM71AQ8IYT1 594 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 TTC30BQ8N4P2 665 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 PNPT1Q8TCS8 783 aaKnown RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 ACMSDQ8TDX5 336 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 SLC35B4Q969S0 331 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 C18orf12Q96KH6 178 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 LMF1Q96S06 567 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 DMRTA2Q96SC8 542 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 CD180Q99467 661 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 BDH2Q9BUT1 245 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 TDRD1Q9BXT4 1180 aaKnown RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 YTHDF1Q9BYJ9 559 aaKnown RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 C10orf88Q9H8K7 445 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 RMI1Q9H9A7 625 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 ABI3Q9P2A4 366 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 SEC14L3Q9UDX4 400 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 FAF1Q9UNN5 650 aaPredicted RBP6.29□□□□□ -1.4
CCDC60-205ENST00000546345 CDYLQ9Y232 598 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 DNAJC16Q9Y2G8 782 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 AP4S1Q9Y587 144 aa6.29□□□□□ -1.4
CCDC60-205ENST00000546345 EML6Q6ZMW3 1958 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 C15orf38-AP3S2A0A0A6YYH1 394 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 TMEM247A6NEH6 219 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 PEX12O00623 359 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 FCHO1O14526 889 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ZNHIT1O43257 154 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 PROM1O43490 865 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ZBTB11O95625 1053 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-205ENST00000546345 TFAP2AP05549 437 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 CD48P09326 243 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ALOX5P09917 674 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 FAM58BPP0C7Q3 252 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 UBTFL6P0CB48 400 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ZNF24P17028 368 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ITGAXP20702 1163 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 PCSK6P29122 969 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 RPA3P35244 121 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-205ENST00000546345 RFC1P35251 1148 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-205ENST00000546345 PTPN9P43378 593 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 TNFSF10P50591 281 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 SMSP52788 366 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 MANFP55145 182 aaKnown RBP6.28□□□□□ -1.4
CCDC60-205ENST00000546345 NOMO3P69849 1222 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 NAB1Q13506 487 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 NFYCQ13952 458 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 MESDQ14696 234 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 CYP2A13Q16696 494 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 INSCQ1MX18 579 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 AGAP9Q5VTM2 703 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 AGAP7PQ5VUJ5 663 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ACAD10Q6JQN1 1059 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 NIPAL1Q6NVV3 410 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 WASH2PQ6VEQ5 465 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 LINC00696Q6ZRV3 163 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 USP45Q70EL2 814 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 STRADAQ7RTN6 431 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ARPINQ7Z6K5 226 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 PAF1Q8N7H5 531 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 DDHD1Q8NEL9 900 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 OR1N1Q8NGS0 311 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 RXFP2Q8WXD0 754 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-205ENST00000546345 AGAP4Q96P64 663 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 TUBA1CQ9BQE3 449 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 MGME1Q9BQP7 344 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 TIMM29Q9BSF4 260 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 NUP85Q9BW27 656 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 TMEM120AQ9BXJ8 343 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 DRC3Q9H069 523 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 OR2AG1Q9H205 316 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 EPS8L2Q9H6S3 715 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 SLC22A11Q9NSA0 550 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 ARL8BQ9NVJ2 186 aa6.28□□□□□ -1.4
CCDC60-205ENST00000546345 THAP1Q9NVV9 213 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms