RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CCDC77Q9BR77 488 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 CAB39LQ9H9S4 337 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 DNAJC11Q9NVH1 559 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF358Q9NW07 568 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 CTNNAL1Q9UBT7 734 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 PTBP2Q9UKA9 531 aaKnown RBP11.6□□□□□ -0.55
COPS7A-221ENST00000546229 ERVK-11Q9UQG0 969 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 NCF1BA6NI72 391 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 NCF1CA8MVU1 366 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CXorf49A8MYA2 514 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 C17orf105B2RV13 164 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 KDM4EB2RXH2 506 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 ACOT7O00154 380 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 RTCAO00442 366 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CLDN4O14493 209 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 FGF17O60258 216 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 SUSD5O60279 629 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 RFPL3SP0C7P2 107 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 NCF1P14598 390 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CD1DP15813 335 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 HOXB4P17483 251 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CNR1P21554 472 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 ATP5A1P25705 553 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CASP2P42575 452 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 KCNC1P48547 511 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 HSPA7P48741 367 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 ART1P52961 327 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 IST1P53990 364 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 TBCCQ15814 346 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 MPEG1Q2M385 716 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 POMZP3Q6PJE2 187 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 B3GNT6Q6ZMB0 384 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 SYDE1Q6ZW31 735 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 SLC22A16Q86VW1 577 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CREG2Q8IUH2 290 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 LAS2Q8IYD9 372 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 KRT78Q8N1N4 520 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 RELL2Q8NC24 303 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 FBXO36Q8NEA4 188 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 OR5M3Q8NGP4 307 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 NUBPLQ8TB37 319 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 PAQR8Q8TEZ7 354 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF473Q8WTR7 871 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 DAZLQ92904 295 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 PTCD3Q96EY7 689 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 SGCZQ96LD1 299 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 GPR22Q99680 433 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF717Q9BY31 904 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 ALOXE3Q9BYJ1 711 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 DLL4Q9NR61 685 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 TRMT1Q9NXH9 659 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 MRPS33Q9Y291 106 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 MTO1Q9Y2Z2 717 aaKnown RBP11.59□□□□□ -0.55
COPS7A-221ENST00000546229 CLCA3PQ9Y6N3 262 aa11.59□□□□□ -0.55
COPS7A-221ENST00000546229 A0A088AWK7 358 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 FIGNL2A6NMB9 653 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 USP27XA6NNY8 438 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 PHGDHO43175 533 aaKnown RBP11.58□□□□□ -0.56
COPS7A-221ENST00000546229 CTAG2O75638 210 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 ZNF10P21506 573 aaPredicted RBP11.58□□□□□ -0.56
COPS7A-221ENST00000546229 HIST1H1TP22492 207 aaPredicted RBP11.58□□□□□ -0.56
COPS7A-221ENST00000546229 PLGLB1Q02325 96 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 ID2Q02363 134 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 EFTUD2Q15029 972 aaKnown RBP eCLIP11.58□□□□□ -0.562e-8■■■■■ 57.6
COPS7A-221ENST00000546229 PIGGQ5H8A4 983 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 FRA10AC1Q70Z53 315 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 LRRC25Q8N386 305 aaPredicted RBP11.58□□□□□ -0.56
COPS7A-221ENST00000546229 TCAIMQ8N3R3 496 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 ACOT4Q8N9L9 421 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 NAXEQ8NCW5 288 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 UBTD2Q8WUN7 234 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 CCT6BQ92526 530 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 KCNC2Q96PR1 638 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 FOXC2Q99958 501 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 SH3GL2Q99962 352 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 ZNF559Q9BR84 538 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 EFCAB11Q9BUY7 163 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 CNPPD1Q9BV87 410 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 KCNF1Q9H3M0 494 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 LIME1Q9H400 295 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 SACM1LQ9NTJ5 587 aa11.58□□□□□ -0.56
COPS7A-221ENST00000546229 CHCHD2Q9Y6H1 151 aaPredicted RBP11.58□□□□□ -0.56
COPS7A-221ENST00000546229 ANKDD1BA6NHY2 528 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 HCN1O60741 890 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 WDR1O75083 606 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 H2AFYO75367 372 aaKnown RBP11.57□□□□□ -0.56
COPS7A-221ENST00000546229 STK16O75716 305 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 IFNA16P05015 189 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 PIGAP37287 484 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 RPL21P46778 160 aaKnown RBP11.57□□□□□ -0.56
COPS7A-221ENST00000546229 STT3AP46977 705 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 ZFP36L2P47974 494 aaKnown RBP11.57□□□□□ -0.56
COPS7A-221ENST00000546229 ARL4CP56559 192 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 POU4F1Q01851 419 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 ASPHQ12797 758 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 DLG1Q12959 904 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 PDIA2Q13087 525 aaKnown RBP11.57□□□□□ -0.56
COPS7A-221ENST00000546229 BMPR2Q13873 1038 aa11.57□□□□□ -0.56
COPS7A-221ENST00000546229 SERTAD2Q14140 314 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms