RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 NDUFAF1Q9Y375 327 aa15.11■□□□□ 0.01
PRPF40A-212ENST00000545856 B3GALT1Q9Y5Z6 326 aa15.11■□□□□ 0.01
PRPF40A-212ENST00000545856 SDK2Q58EX2 2172 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CCDC154A6NI56 674 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 ANGPT2O15123 496 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CTNSO60931 367 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 STK17BO94768 372 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 KIAA0754O94854 1291 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 BMP10O95393 424 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 TIAF1O95411 115 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CCNYL3P0C7X3 344 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 ITIH1P19827 911 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 ITGAXP20702 1163 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CALB2P22676 271 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 NTSP30990 170 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 GALNSP34059 522 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 ETV5P41161 510 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 FRKP42685 505 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 XCR1P46094 333 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 IGLV3-21P80748 117 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 SHC2P98077 582 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 SERTAD2Q14140 314 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 RTP5Q14D33 572 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 FAM174BQ3ZCQ3 159 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 OVCH1Q7RTY7 1134 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 DGLUCYQ7Z3D6 616 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 TICAM1Q8IUC6 712 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 FUNDC1Q8IVP5 155 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 DPP10Q8N608 796 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 FAM47BQ8NA70 645 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CDC26Q8NHZ8 85 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 DNAJB14Q8TBM8 379 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 NACC2Q96BF6 587 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 ZBED6CLQ96FA7 236 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 SLC46A1Q96NT5 459 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 DUSP26Q9BV47 211 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 SLC35C2Q9NQQ7 365 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 TRPC4Q9UBN4 977 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 TAGLN3Q9UI15 199 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 BTNL2Q9UIR0 455 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CES1P1Q9UKY3 287 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 G3BP2Q9UN86 482 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 PADI2Q9Y2J8 665 aa15.1■□□□□ 0.01
PRPF40A-212ENST00000545856 CFAP54Q96N23 3096 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 PRSS51A0A1B0GVH4 220 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 ZNF860A6NHJ4 632 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 GABRR3A8MPY1 467 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 C9orf172C9J069 976 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 STMND1H3BQB6 276 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 RAB40ALP0C0E4 278 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 COX4I1P13073 169 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 ZFP36L2P47974 494 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 RASSF2P50749 326 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 GABREP78334 506 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 CPZQ66K79 652 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 MRPL14Q6P1L8 145 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 C6orf15Q6UXA7 325 aaPredicted RBP15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 HACD2Q6Y1H2 254 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 YTHDF3Q7Z739 585 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 KRTCAP2Q8N6L1 136 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 OR9I1Q8NGQ6 314 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 CLHC1Q8NHS4 586 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 ROPN1LQ96C74 230 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 NXPE2Q96DL1 559 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 CTRCQ99895 268 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 HCN3Q9P1Z3 774 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 ARMCX1Q9P291 453 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 IFT80Q9P2H3 777 aaPredicted RBP15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 UTS2RQ9UKP6 389 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 PADI1Q9ULC6 663 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 EXO1Q9UQ84 846 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 MAN2B2Q9Y2E5 1009 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 ZNF780BQ9Y6R6 833 aa15.09■□□□□ 0.01
PRPF40A-212ENST00000545856 CACNA1AO00555 2505 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 VSTM2BA6NLU5 285 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 CDRT15L2A8MXV6 281 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 C21orf140B9A014 251 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 PDPK1O15530 556 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 TNFSF15O95150 251 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 GPR75O95800 540 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 NTRK1P04629 796 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 CSNK2A2P19784 350 aaPredicted RBP15.08■□□□□ 0
PRPF40A-212ENST00000545856 IL12AP29459 219 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 MPIP34949 423 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 MAGEA8P43361 318 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 TRPC1P48995 793 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 MAPKAPK3Q16644 382 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 SPANXN4Q5MJ08 99 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 TREML1Q86YW5 311 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 SCUBE1Q8IWY4 988 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 SLC38A9Q8NBW4 561 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 PLPP5Q8NEB5 264 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 OR4K14Q8NGD5 310 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 OR5T3Q8NGG3 340 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 PSMA8Q8TAA3 256 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 KLHL29Q96CT2 875 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 NSL1Q96IY1 281 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 ITCHQ96J02 903 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 TEX37Q96LM6 180 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 ZNF578Q96N58 590 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms