RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 OR8D2Q9GZM6 311 aa19.62■□□□□ 0.73
SCARB1-210ENST00000545493 PRM3Q9NNZ6 103 aa19.62■□□□□ 0.73
SCARB1-210ENST00000545493 DEPPQ9NTK1 212 aa19.62■□□□□ 0.73
SCARB1-210ENST00000545493 MYOTQ9UBF9 498 aa19.62■□□□□ 0.73
SCARB1-210ENST00000545493 YARS2Q9Y2Z4 477 aaKnown RBP19.62■□□□□ 0.73
SCARB1-210ENST00000545493 MEMO1Q9Y316 297 aa19.62■□□□□ 0.73
SCARB1-210ENST00000545493 A0A0G2JMM0 328 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 A0A1W2PPB8 328 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 A0A1W2PRS3 328 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 KIR3DP1A8MWS1 328 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 TFECO14948 347 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 PRKRAO75569 313 aaKnown RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 URI1O94763 535 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 OR6B1O95007 311 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 SIX3O95343 332 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 ABOP16442 354 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 CPN2P22792 545 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 ECHS1P30084 290 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 PHBP35232 272 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 SOX3P41225 446 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 ALDH18A1P54886 795 aaKnown RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 TNFRSF17Q02223 184 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 SERTAD2Q14140 314 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 PCBP2Q15366 365 aaKnown RBP eCLIP19.61■□□□□ 0.731e-13■□□□□ 8.9
SCARB1-210ENST00000545493 WHAMMP3Q1A5X7 153 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 AP5B1Q2VPB7 878 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 SP5Q6BEB4 398 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 HSDL2Q6YN16 418 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 CHSY3Q70JA7 882 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 GOLGA7Q7Z5G4 137 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 MYLK4Q86YV6 388 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 RELL1Q8IUW5 271 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 ZFP62Q8NB50 900 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 NOA1Q8NC60 698 aaKnown RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 PSD4Q8NDX1 1056 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 PHF12Q96QT6 1004 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 MTERF1Q99551 399 aaKnown RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 ZNF358Q9NW07 568 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 DMGDHQ9UI17 866 aaKnown RBP19.61■□□□□ 0.73
SCARB1-210ENST00000545493 TSC22D4Q9Y3Q8 395 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 ANGPTL3Q9Y5C1 460 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 SPACA6W5XKT8 324 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 DCHS2Q6V1P9 2916 aa19.61■□□□□ 0.73
SCARB1-210ENST00000545493 PINLYPA6NC86 204 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 A8MVJ9 347 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 WWP2O00308 870 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 HS6ST1O60243 411 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 ZNF354AO60765 605 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-210ENST00000545493 ETHE1O95571 254 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 PIK3CBP42338 1070 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 HNRNPH2P55795 449 aaKnown RBP19.6■□□□□ 0.73
SCARB1-210ENST00000545493 RPS13P62277 151 aaKnown RBP19.6■□□□□ 0.73
SCARB1-210ENST00000545493 GTF2H2Q13888 395 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 CMPK2Q5EBM0 449 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 LIPJQ5W064 366 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 OR4C11Q6IEV9 310 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 GTF2H2CQ6P1K8 395 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 GPALPP1Q8IXQ4 340 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 C16orf52Q8NHV5 167 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 AGAP11Q8TF27 550 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 SLC44A1Q8WWI5 657 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 ASB15Q8WXK1 588 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 ACTR8Q9H981 624 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 TIMMDC1Q9NPL8 285 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 HPF1Q9NWY4 346 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 CPSF2Q9P2I0 782 aaKnown RBP19.6■□□□□ 0.73
SCARB1-210ENST00000545493 PCNX1Q96RV3 2341 aa19.6■□□□□ 0.73
SCARB1-210ENST00000545493 H0YIV9 168 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 KLRC4-KLRK1H3BQV0 150 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ADAM10O14672 748 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 UGDHO60701 494 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ACSL3O95573 720 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 TUBB4AP04350 444 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ESRRAP11474 423 aaPredicted RBP19.59■□□□□ 0.73
SCARB1-210ENST00000545493 HTR1EP28566 365 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 TYK2P29597 1187 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 STT3AP46977 705 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 NR0B1P51843 470 aaKnown RBP19.59■□□□□ 0.73
SCARB1-210ENST00000545493 RAP1GDS1P52306 607 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 RNF4P78317 190 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 SLAMF1Q13291 335 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ZNF630Q2M218 657 aaPredicted RBP19.59■□□□□ 0.73
SCARB1-210ENST00000545493 C18orf63Q68DL7 685 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 DGAT2L6Q6ZPD8 337 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 OR4N5Q8IXE1 308 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ZCCHC7Q8N3Z6 543 aaKnown RBP19.59■□□□□ 0.73
SCARB1-210ENST00000545493 MMGT1Q8N4V1 131 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ZNF721Q8TF20 911 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 VPS11Q9H270 941 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 MTRF1LQ9UGC7 380 aaKnown RBP19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ADGRE2Q9UHX3 823 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 ERVK-11Q9UQG0 969 aa19.59■□□□□ 0.73
SCARB1-210ENST00000545493 GTF3C1Q12789 2109 aa19.58■□□□□ 0.73
SCARB1-210ENST00000545493 AGAP20933 346 aa19.58■□□□□ 0.72
SCARB1-210ENST00000545493 FOLH1Q04609 750 aa19.58■□□□□ 0.72
SCARB1-210ENST00000545493 KLC3Q6P597 504 aa19.58■□□□□ 0.72
SCARB1-210ENST00000545493 IL20RBQ6UXL0 311 aa19.58■□□□□ 0.72
SCARB1-210ENST00000545493 DOLPP1Q86YN1 238 aa19.58■□□□□ 0.72
SCARB1-210ENST00000545493 PTGR2Q8N8N7 351 aaPredicted RBP19.58■□□□□ 0.72
SCARB1-210ENST00000545493 L3MBTL4Q8NA19 623 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms