RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CATSPEREQ5SY80 951 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CBLL1Q75N03 491 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 NAGSQ8N159 534 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 FAM98AQ8NCA5 519 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZCCHC10Q8TBK6 192 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 WFDC5Q8TCV5 224 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 GNPDA2Q8TDQ7 276 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 KLK6Q92876 244 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 RAB7BQ96AH8 199 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZNF419Q96HQ0 510 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 GPN2Q9H9Y4 310 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 IL23AQ9NPF7 189 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZCCHC3Q9NUD5 404 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 MSRAQ9UJ68 235 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 POLR2AP24928 1970 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 FAM155AB1AL88 458 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 H7C2Y5 167 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 RASGRP1O95267 797 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 AGR2O95994 175 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ETFAP13804 333 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CSNK2A2P19784 350 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 CPN2P22792 545 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CSTF2P33240 577 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS50-220ENST00000544910 CDKN2CP42773 168 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SLC15A1P46059 708 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 AVPR1BP47901 424 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 MAZP56270 477 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 SELENOWP63302 87 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZNF45Q02386 682 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 HSD17B12Q53GQ0 312 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 FAAH2Q6GMR7 532 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SLC36A4Q6YBV0 504 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 RNF111Q6ZNA4 994 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ABHD13Q7L211 337 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 COMMD6Q7Z4G1 85 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SPNS2Q8IVW8 549 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ELMOD2Q8IZ81 293 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SAMD14Q8IZD0 417 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 L3MBTL4Q8NA19 623 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 HHIPL1Q96JK4 782 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 IL4I1Q96RQ9 567 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 POLR2J2Q9GZM3 115 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 LYARQ9NX58 379 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 FBXO10Q9UK96 956 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 HS3ST2Q9Y278 367 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CMAHPQ9Y471 501 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZNF451Q9Y4E5 1061 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 PCDHGA8Q9Y5G5 932 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 LCTP09848 1927 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 RLFQ13129 1914 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 GABRR3A8MPY1 467 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 PSIP1O75475 530 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 SLC16A8O95907 504 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 TIMP1P01033 207 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ACPPP15309 386 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 NT5EP21589 574 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CD72P21854 359 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 WDR5P61964 334 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 EIF5AP63241 154 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 GPM6BQ13491 265 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 PROX2Q3B8N5 592 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 LCTLQ6UWM7 567 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 FAM220AQ7Z4H9 259 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 C7orf61Q8IZ16 206 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 KLHL36Q8N4N3 616 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 DPF3Q92784 378 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 DNASE1L2Q92874 299 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CNDP2Q96KP4 475 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZIC5Q96T25 663 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 TSSK6Q9BXA6 273 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 OR51I1Q9H343 314 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 DSN1Q9H410 356 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 TMEM27Q9HBJ8 222 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 MYNNQ9NPC7 610 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ACSL6Q9UKU0 697 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ASB1Q9Y576 335 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 STK25O00506 426 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 AKAP8O43823 692 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 SOX14O95416 240 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 HLA-FP30511 346 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CD97P48960 835 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CRISP1P54107 249 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 BTN3A2P78410 334 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DEFB103AP81534 67 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MXD1Q05195 221 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ST3GAL4Q11206 333 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DNASE1L3Q13609 305 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SMCO1Q147U7 214 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 FAM219BQ5XKK7 198 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 OR4C11Q6IEV9 310 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 FBXO42Q6P3S6 717 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 IQCHQ86VS3 1027 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 WBP2Q969T9 261 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 C11orf24Q96F05 449 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 TRMT61BQ9BVS5 477 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 HCFC1R1Q9NWW0 138 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 UPB1Q9UBR1 384 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ACSL5Q9ULC5 683 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms