RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TMEM132CQ8N3T6 1108 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 C7orf57Q8NEG2 295 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TANKQ92844 425 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 CCDC126Q96EE4 140 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 GSTO2Q9H4Y5 243 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 ELOVL6Q9H5J4 265 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 CDCP1Q9H5V8 836 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 RPF2Q9H7B2 306 aaKnown RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 BRF2Q9HAW0 419 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 FARSBQ9NSD9 589 aaKnown RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 LYARQ9NX58 379 aaKnown RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 ZNF223Q9UK11 482 aaPredicted RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 ADAM29Q9UKF5 820 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 GRID1Q9ULK0 1009 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 PCDHGB6Q9Y5F9 930 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 V9GYY5 206 aaPredicted RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 A0A1W2PR48 441 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 FGF17O60258 216 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 PRAMEF2O60811 474 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 OR4F21O95013 312 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 CBX6O95503 412 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 MLYCDO95822 493 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 PDYNP01213 254 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 KRT4P19013 534 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 GNLYP22749 145 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 CD96P40200 585 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 UQCRFS1P47985 274 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 MLF1P58340 268 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 SRSF1Q07955 248 aaKnown RBP eCLIP14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 LCP2Q13094 533 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 BIKQ13323 160 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 INAQ16352 499 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 ERCC6LQ2NKX8 1250 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 CCDC153Q494R4 210 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 FAM219BQ5XKK7 198 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 C18orf63Q68DL7 685 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 NUDT13Q86X67 352 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 METTL4Q8N3J2 472 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 RIBC1Q8N443 379 aaPredicted RBP14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 MORN4Q8NDC4 146 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 MDS2Q8NDY4 140 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 RDH11Q8TC12 318 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 GRHL3Q8TE85 626 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 VMP1Q96GC9 406 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 MRPL1Q9BYD6 325 aaKnown RBP14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 DEFB126Q9BYW3 111 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 SLC29A3Q9BZD2 475 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 TRIM45Q9H8W5 580 aaPredicted RBP14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 ABI3Q9P2A4 366 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 LGALS13Q9UHV8 139 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 SNX6Q9UNH7 406 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 STK38LQ9Y2H1 464 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 PTPN13Q12923 2485 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 ESPL1Q14674 2120 aa14.41□□□□□ -0.1
ECHDC2-223ENST00000542552 HECTD1Q9ULT8 2610 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 MYOCOSA0A1B0GUC4 107 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 GABRR3A8MPY1 467 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 MANBAO00462 879 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 COPEO14579 308 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 DDAH2O95865 285 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 MYL2P10916 166 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 TPP2P29144 1249 aaPredicted RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 TLX1P31314 330 aaPredicted RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 TRHRP34981 398 aaPredicted RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 CLCN2P51788 898 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 PKNOX1P55347 436 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 DNAJB13P59910 316 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 TBL3Q12788 808 aaKnown RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 SGO1Q5FBB7 561 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 ZNF324BQ6AW86 544 aaPredicted RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 CYP20A1Q6UW02 462 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 GPRIN3Q6ZVF9 776 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 MREGQ8N565 214 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 CDYL2Q8N8U2 506 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 OR14A16Q8NHC5 309 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 FAR1Q8WVX9 515 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 SELENOMQ8WWX9 145 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 DAZLQ92904 295 aaKnown RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 NCLNQ969V3 563 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 SIGLEC12Q96PQ1 595 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 TAAR6Q96RI8 345 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 UTP23Q9BRU9 249 aaKnown RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 PARD6BQ9BYG5 372 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 ROPN1BQ9BZX4 212 aaPredicted RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 C12orf65Q9H3J6 166 aaKnown RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 ROPN1Q9HAT0 212 aaPredicted RBP14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 AGPAT4Q9NRZ5 378 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 MKS1Q9NXB0 559 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 AHSPQ9NZD4 102 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 MAP10Q9P2G4 905 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 RAB21Q9UL25 225 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 CLCA3PQ9Y6N3 262 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 POLEQ07864 2286 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 HIVEP3Q5T1R4 2406 aa14.4□□□□□ -0.1
ECHDC2-223ENST00000542552 USP9YO00507 2555 aaPredicted RBP14.39□□□□□ -0.11
ECHDC2-223ENST00000542552 TRBV11-1A0A0K0K1C0 115 aa14.39□□□□□ -0.11
ECHDC2-223ENST00000542552 TLDC2A0PJX2 215 aa14.39□□□□□ -0.11
ECHDC2-223ENST00000542552 TMEM200CA6NKL6 621 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms