RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 KIAA1143Q96AT1 154 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-205ENST00000542541 MARK4Q96L34 752 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 RBCK1Q9BYM8 510 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 REEP4Q9H6H4 257 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 PRTFDC1Q9NRG1 225 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 LANCL2Q9NS86 450 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 KCND3Q9UK17 655 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 CROTQ9UKG9 612 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 MMACHCQ9Y4U1 282 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 NCOR2Q9Y618 2525 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 AKAP10O43572 662 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 CCDC22O60826 627 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 CTNSO60931 367 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 LRATO95237 230 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 CYC1P08574 325 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 MRPL19P49406 292 aaKnown RBP21.75■■□□□ 1.07
HOMER3-205ENST00000542541 CLNS1AP54105 237 aaKnown RBP21.75■■□□□ 1.07
HOMER3-205ENST00000542541 PCBP4P57723 403 aaKnown RBP21.75■■□□□ 1.07
HOMER3-205ENST00000542541 C21orf58P58505 322 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 MC1RQ01726 317 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 SLC13A2Q13183 592 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 ENDOVQ8N8Q3 282 aaKnown RBP21.75■■□□□ 1.07
HOMER3-205ENST00000542541 GFM2Q969S9 779 aaKnown RBP21.75■■□□□ 1.07
HOMER3-205ENST00000542541 ZBTB18Q99592 522 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 ZIM2Q9NZV7 527 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 MKL2Q9ULH7 1088 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 FARSAQ9Y285 508 aaKnown RBP21.75■■□□□ 1.07
HOMER3-205ENST00000542541 SDK2Q58EX2 2172 aa21.75■■□□□ 1.07
HOMER3-205ENST00000542541 GLOD5A6NK44 160 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 ANKRD28O15084 1053 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 JRKO75564 520 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 CDC123O75794 336 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-205ENST00000542541 DLSTP36957 453 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 DNASE1L3Q13609 305 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 SQLEQ14534 574 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 SLC48A1Q6P1K1 146 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 RIPOR1Q6ZS17 1223 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 PRSS58Q8IYP2 241 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 GLB1L3Q8NCI6 653 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-205ENST00000542541 ZNF764Q96H86 408 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-205ENST00000542541 SPSB2Q99619 263 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 EFHD1Q9BUP0 239 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 TMEM45AQ9NWC5 275 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 TAS2R7Q9NYW3 318 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 DKK4Q9UBT3 224 aa21.74■■□□□ 1.07
HOMER3-205ENST00000542541 COPG1Q9Y678 874 aaKnown RBP21.74■■□□□ 1.07
HOMER3-205ENST00000542541 SYNDIG1LA6NDD5 238 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PGRMC2O15173 223 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 SLC22A3O75751 556 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 HEXBP07686 556 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 FURINP09958 794 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 BIKQ13323 160 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 QSOX2Q6ZRP7 698 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 TICAM1Q8IUC6 712 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 RIMKLAQ8IXN7 391 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 SAMD14Q8IZD0 417 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 SHISA5Q8N114 240 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 OR2Y1Q8NGV0 311 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 DNAJB14Q8TBM8 379 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PPCDCQ96CD2 204 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 SOX17Q9H6I2 414 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PTRH2Q9Y3E5 179 aaKnown RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 AHCTF1Q8WYP5 2266 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 SCAMP2O15127 329 aaKnown RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 TBX19O60806 448 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 CNOT3O75175 753 aaKnown RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PRKRAO75569 313 aaKnown RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 KLF7O75840 302 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 COX7A2P14406 83 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PTPN4P29074 926 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 FOLR3P41439 243 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 EMP2P54851 167 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 NME5P56597 212 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 UFM1P61960 85 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 DPY19L1Q2PZI1 675 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 LAPTM4BQ86VI4 370 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 CPSF7Q8N684 471 aaKnown RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 KRTCAP2Q8N6L1 136 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 ANKS4BQ8N8V4 417 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 CCDC197Q8NCU1 140 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 TMEM52Q8NDY8 209 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PLPP5Q8NEB5 264 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 OR4K14Q8NGD5 310 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PTCHD1Q96NR3 888 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 CRB3Q9BUF7 120 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 ACTL8Q9H568 366 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 GPN2Q9H9Y4 310 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 GIMAP4Q9NUV9 329 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 ATAD3AQ9NVI7 634 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 ATP6V1HQ9UI12 483 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 UTS2RQ9UKP6 389 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 CES1P1Q9UKY3 287 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 TCFL5Q9UL49 500 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 EXO1Q9UQ84 846 aaKnown RBP21.73■■□□□ 1.07
HOMER3-205ENST00000542541 PCDHGA6Q9Y5G7 932 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 ZNF780BQ9Y6R6 833 aa21.73■■□□□ 1.07
HOMER3-205ENST00000542541 LOC101059948A0A1B0GTJ6 334 aa21.72■■□□□ 1.07
HOMER3-205ENST00000542541 MED19A0JLT2 244 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-205ENST00000542541 GABRR3A8MPY1 467 aa21.72■■□□□ 1.07
HOMER3-205ENST00000542541 IDSB3KWA1 339 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms