RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MPIP34949 423 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 GNA13Q14344 377 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ZNHIT3Q15649 155 aaPredicted RBP15.39■□□□□ 0.05
VARS2-212ENST00000542001 AFMIDQ63HM1 303 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 C22orf42Q6IC83 251 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ZSWIM9Q86XI8 627 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 MARCH9Q86YJ5 346 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 EID2BQ96D98 161 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 GAL3ST4Q96RP7 486 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 IKZF2Q9UKS7 526 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 PPT2Q9UMR5 302 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 HEPACAM2A8MVW5 462 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 GTPBP1O00178 669 aaKnown RBP15.39■□□□□ 0.05
VARS2-212ENST00000542001 CEBPBP17676 345 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 DAPP51397 102 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 OR2B6P58173 313 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 C11orf91Q3C1V1 193 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 OR51G2Q8NGK0 314 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 AHCYL2Q96HN2 611 aaKnown RBP15.39■□□□□ 0.05
VARS2-212ENST00000542001 PKMYT1Q99640 499 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 TTLL2Q9BWV7 592 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 OR51I1Q9H343 314 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 IL1RAPQ9NPH3 570 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 FAM92AA1XBS5 289 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 CHURC1-FNTBB4DL54 471 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 RETP07949 1114 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 SSTR4P31391 388 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 GJA8P48165 433 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 HLA-DQA1Q5Y7H0 255 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 CPZQ66K79 652 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 SIPA1Q96FS4 1042 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ANKRA2Q9H9E1 313 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ABCD2Q9UBJ2 740 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 RPL36Q9Y3U8 105 aaKnown RBP15.39■□□□□ 0.05
VARS2-212ENST00000542001 A0A1B0GVC2 190 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 A6NIN4 97 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 PGRMC2O15173 223 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CAPN5O15484 640 aaPredicted RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 B4GALT2O60909 372 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CAPNS1P04632 268 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CTSAP10619 480 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 RPS3P23396 243 aaKnown RBP eCLIP15.38■□□□□ 0.052e-8■■□□□ 13.5
VARS2-212ENST00000542001 TM4SF4P48230 202 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 KCNC4Q03721 635 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 HNRNPA0Q13151 305 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 SP140Q13342 867 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 ZC3H14Q6PJT7 736 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 B3GNT8Q7Z7M8 397 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 TMEM179BQ7Z7N9 219 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 GATSQ8NAP1 163 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 GATAD2BQ8WXI9 593 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 RBM18Q96H35 190 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 HDHD5Q9BXW7 423 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 ZC4H2Q9NQZ6 224 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 MRPL39Q9NYK5 338 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 ADAM30Q9UKF2 790 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 SPTBP11277 2137 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 EDDM13A0A1B0GTR0 161 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 GPR4P46093 362 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 SOX9P48436 509 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CSTF1Q05048 431 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 ILF3Q12906 894 aaKnown RBP eCLIP15.38■□□□□ 0.05
VARS2-212ENST00000542001 TUBA3CQ13748 450 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 COMMD2Q86X83 199 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 LRR1Q96L50 414 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 RPRD1BQ9NQG5 326 aaKnown RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 CNIH4Q9P003 139 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 ZNF221Q9UK13 617 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CLCA3PQ9Y6N3 262 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 NRXN2Q9P2S2 1712 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 XKR7Q5GH72 579 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 GPR149Q86SP6 731 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 PEX5LQ8IYB4 626 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 PIP5K1AQ99755 562 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CPPED1Q9BRF8 314 aaPredicted RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 SPTBN2O15020 2390 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 DOCK1Q14185 1865 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 FUOMA2VDF0 154 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 EFCAB14O75071 495 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 OR6A2O95222 327 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 FHP07954 510 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 MPC1LP0DKB6 136 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CDH11P55287 796 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 SPRED1Q7Z699 444 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 FBXO15Q8NCQ5 510 aaPredicted RBP15.38■□□□□ 0.05
VARS2-212ENST00000542001 FAM46DQ8NEK8 389 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 OR51L1Q8NGJ5 315 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 CA5BQ9Y2D0 317 aa15.38■□□□□ 0.05
VARS2-212ENST00000542001 A0A1W2PQU0 124 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 WASHC1A8K0Z3 465 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 ADRB3P13945 408 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 NKG7Q16617 165 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 WASH2PQ6VEQ5 465 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 TSACCQ96A04 125 aaPredicted RBP15.37■□□□□ 0.05
VARS2-212ENST00000542001 ZNF689Q96CS4 500 aaPredicted RBP15.37■□□□□ 0.05
VARS2-212ENST00000542001 ASPDHA6ND91 283 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 IMPA1P29218 277 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 MASP1P48740 699 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms