RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF441Q8N8Z8 693 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 OR52N5Q8NH56 324 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SPATA18Q8TC71 538 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 GANCQ8TET4 914 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SEPT8Q92599 483 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 FCGR1BQ92637 280 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 THRSPQ92748 146 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 EPSTI1Q96J88 318 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 IL17FQ96PD4 163 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 INPP4AQ96PE3 977 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 NDNQ99608 321 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CCDC3Q9BQI4 270 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 THUMPD2Q9BTF0 503 aaKnown RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 DCLRE1BQ9H816 532 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ZBTB20Q9HC78 741 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 PIGVQ9NUD9 493 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF701Q9NV72 531 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CGNQ9P2M7 1197 aaKnown RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 IL36AQ9UHA7 158 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 PRDM4Q9UKN5 801 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 DNPEPQ9ULA0 475 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 TMED7Q9Y3B3 224 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 IKBKGQ9Y6K9 419 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SCN5AQ14524 2016 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 COL5A3P25940 1745 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 MEGF6O75095 1541 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 HEG1Q9ULI3 1381 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 LOC101059948A0A1B0GTJ6 334 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 H0YIG0 161 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 ACSL4O60488 711 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 CTSVO60911 334 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 YES1P07947 543 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 F7P08709 466 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 EFNA1P20827 205 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 CA4P22748 312 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 CA6P23280 308 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 ACP1P24666 158 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 PITPNBP48739 271 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 NR2C2P49116 596 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 DNA2P51530 1060 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 DLX5P56178 289 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 RPL24P83731 157 aaKnown RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SGCGQ13326 291 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 CDH18Q13634 790 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 GIT2Q14161 759 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 KLHL10Q6JEL2 608 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 G2E3Q7L622 706 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SLC16A9Q7RTY1 509 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 STHQ8IWL8 128 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 RCOR2Q8IZ40 523 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 TMEM99Q8N816 258 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 POC1AQ8NBT0 407 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 OR7A2PQ8NGA2 310 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 HSD17B8Q92506 261 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 NR4A3Q92570 626 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SLCO4A1Q96BD0 722 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 GUCD1Q96NT3 240 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 PRMT1Q99873 361 aaKnown RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SSX3Q99909 188 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 PSD2Q9BQI7 771 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 CARD6Q9BX69 1037 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 ACPTQ9BZG2 426 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 LAT2Q9GZY6 243 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 RIBC2Q9H4K1 309 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 TMEM231Q9H6L2 316 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 LRRC4Q9HBW1 653 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SDR39U1Q9NRG7 319 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 MRPL17Q9NRX2 175 aaKnown RBP3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SLC35D1Q9NTN3 355 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 PANK4Q9NVE7 773 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 SOHLH2Q9NX45 425 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 CLIP2Q9UDT6 1046 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 FAM153AQ9UHL3 310 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 MAN1B1Q9UKM7 699 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 DUSP12Q9UNI6 340 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 RIPK3Q9Y572 518 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 NRXN2Q9P2S2 1712 aa3.81□□□□□ -1.8
SNHG1-217ENST00000541578 RAB3GAP2Q9H2M9 1393 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 FAM205AQ6ZU69 1335 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 SLX4Q8IY92 1834 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 A0A087WYN8 130 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 C5orf60A6NFR6 353 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 H3BMM5 538 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 OGTO15294 1046 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 LINC01565O15544 149 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 XPNPEP2O43895 674 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 PTBP3O95758 552 aaKnown RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 PDGFBP01127 241 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 IGHV4-39P01824 125 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 RALAP11233 206 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 CETPP11597 493 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 FGF5P12034 268 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 NCF1P14598 390 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 MSH3P20585 1137 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 HLA-FP30511 346 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms