RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MLYCDO95822 493 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 MAOAP21397 527 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 SLC18A1P54219 525 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 RUNX2Q13950 521 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 RCN2Q14257 317 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 EXT1Q16394 746 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 HHATQ5VTY9 493 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 CLEC18BQ6UXF7 455 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 CLEC18CQ8NCF0 446 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 GRHL3Q8TE85 626 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 HAS2Q92819 552 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 GAL3ST3Q96A11 431 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 QRFPRQ96P65 431 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 REXO4Q9GZR2 422 aaKnown RBP13.34□□□□□ -0.27
LTBR-209ENST00000541102 TEKT2Q9UIF3 430 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 TSC22D4Q9Y3Q8 395 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 PCDHGA11Q9Y5H2 935 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 TRAV17A0A0B4J275 112 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 B3GALT2O43825 422 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 NPHS1O60500 1241 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 GSTM2P28161 218 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 PIK3CBP42338 1070 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 ST13P50502 369 aaKnown RBP13.33□□□□□ -0.28
LTBR-209ENST00000541102 TNFSF10P50591 281 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 PKNOX1P55347 436 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 ELOAQ14241 798 aaKnown RBP13.33□□□□□ -0.28
LTBR-209ENST00000541102 TTC19Q6DKK2 380 aaPredicted RBP13.33□□□□□ -0.28
LTBR-209ENST00000541102 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 ABHD17CQ6PCB6 329 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 ZNF793Q6ZN11 406 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 OR2L5Q8NG80 312 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 M1APQ8TC57 530 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 METTL6Q8TCB7 284 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 AGR3Q8TD06 166 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 UBE2E3Q969T4 207 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
LTBR-209ENST00000541102 NECTIN3Q9NQS3 549 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 PRDM7Q9NQW5 492 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 FIS1Q9Y3D6 152 aa13.33□□□□□ -0.28
LTBR-209ENST00000541102 USP9XQ93008 2570 aaPredicted RBP13.33□□□□□ -0.28
LTBR-209ENST00000541102 SVILO95425 2214 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 A0A088AWK7 358 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 ANKUB1A6NFN9 424 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 FOXE1O00358 373 aaPredicted RBP13.32□□□□□ -0.28
LTBR-209ENST00000541102 SEMA7AO75326 666 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 SERPINE1P05121 402 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
LTBR-209ENST00000541102 CERS1P27544 350 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 SLC26A5P58743 744 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 TGM3Q08188 693 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 UGT3A2Q3SY77 523 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 ACER2Q5QJU3 275 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 DEPDC1Q5TB30 811 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 KHDRBS2Q5VWX1 349 aaKnown RBP13.32□□□□□ -0.28
LTBR-209ENST00000541102 QSOX2Q6ZRP7 698 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 CRLF3Q8IUI8 442 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 BEST3Q8N1M1 668 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 SELENOMQ8WWX9 145 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 CMTM7Q96FZ5 175 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 SORT1Q99523 831 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 NPLQ9BXD5 320 aaPredicted RBP13.32□□□□□ -0.28
LTBR-209ENST00000541102 ACPTQ9BZG2 426 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 TUBB1Q9H4B7 451 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 ELOVL6Q9H5J4 265 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 COPS7BQ9H9Q2 264 aaPredicted RBP13.32□□□□□ -0.28
LTBR-209ENST00000541102 MMP25Q9NPA2 562 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 NKIRAS1Q9NYS0 192 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 ZDHHC2Q9UIJ5 367 aa13.32□□□□□ -0.28
LTBR-209ENST00000541102 BLACEA4D250 179 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 OR5H15A6NDH6 313 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 PLPP1O14494 284 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 MAN1A2O60476 641 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 EEDO75530 441 aaKnown RBP13.31□□□□□ -0.28
LTBR-209ENST00000541102 ENO1P06733 434 aaKnown RBP13.31□□□□□ -0.28
LTBR-209ENST00000541102 HMOX2P30519 316 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 BSGP35613 385 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 MTTPP55157 894 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 RAB38P57729 211 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 TAS2R50P59544 299 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 ABCE1P61221 599 aaKnown RBP13.31□□□□□ -0.28
LTBR-209ENST00000541102 HMGCS1Q01581 520 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 BST1Q10588 318 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 ASPHQ12797 758 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 IFT88Q13099 833 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 MEP1AQ16819 746 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 KANK2Q63ZY3 851 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 H3F3CQ6NXT2 135 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 FAM180AQ6UWF9 173 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 KIF2BQ8N4N8 673 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 FAM47BQ8NA70 645 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 SUN3Q8TAQ9 357 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 FAR1Q8WVX9 515 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 REPS1Q96D71 796 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 SERINC2Q96SA4 455 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 BARD1Q99728 777 aaKnown RBP13.31□□□□□ -0.28
LTBR-209ENST00000541102 MRPL1Q9BYD6 325 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms