RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SEMG1P04279 462 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC35G6P0C7Q6 338 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 RAP2AP10114 183 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 DRD2P14416 443 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 UQCRBP14927 111 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 UQCRC2P22695 453 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 KDELR2P33947 212 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 CHI3L1P36222 383 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 FEN1P39748 380 aaKnown RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 CTSKP43235 329 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 CAPZBP47756 277 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 DHPSP49366 369 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 AFF3P51826 1226 aaKnown RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 C21orf59P57076 290 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 PPP1R8Q12972 351 aaKnown RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC48A1Q6P1K1 146 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 RBM12BQ8IXT5 1001 aaKnown RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 ARHGEF39Q8N4T4 335 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 CBR4Q8N4T8 237 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 EDAQ92838 391 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 OTUB1Q96FW1 271 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 CENPNQ96H22 339 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 VCX3BQ9H321 246 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 ANKRA2Q9H9E1 313 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 OLAHQ9NV23 265 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 MYOCOSA0A1B0GUC4 107 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM86C2PA6NEL3 165 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 LILRA5A6NI73 299 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 PLOD2O00469 737 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 OPN1SWP03999 348 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 CDH3P22223 829 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 PPIBP23284 216 aaKnown RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 PCGF2P35227 344 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 GSTM5P46439 218 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 NCBP2P52298 156 aaKnown RBP eCLIP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 ARFIP1P53367 373 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 LIM2P55344 173 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 FOLH1Q04609 750 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 CHRNB3Q05901 458 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 SIGLEC14Q08ET2 396 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 LRRC74AQ0VAA2 488 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 LTB4RQ15722 352 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 MAPK11Q15759 364 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 GPR19Q15760 415 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 C14orf28Q4W4Y0 310 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM98BQ52LJ0 330 aaKnown RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 WDR45BQ5MNZ6 344 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 TMTC4Q5T4D3 741 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 GCNT6Q5T4J0 391 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 TNFAIP8L2Q6P589 184 aaPredicted RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 ISLR2Q6UXK2 745 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 OLIG3Q7RTU3 272 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 SPRED1Q7Z699 444 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 TMEM179BQ7Z7N9 219 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 CCDC116Q8IYX3 515 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 CSNK1A1LQ8N752 337 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 C19orf47Q8N9M1 422 aaKnown RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 DOK4Q8TEW6 326 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 RAB8BQ92930 207 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 NEURL3Q96EH8 262 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF681Q96N22 645 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC38A3Q99624 504 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 FAIM2Q9BWQ8 316 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 EHD3Q9NZN3 535 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 FAF1Q9UNN5 650 aaPredicted RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 ABCG2Q9UNQ0 655 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 ASXL3Q9C0F0 2248 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 MYO15AQ9UKN7 3530 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 SPTBP11277 2137 aa11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 ARID1BQ8NFD5 2236 aaPredicted RBP11.59□□□□□ -0.55
AP003559.1-201ENST00000540906 MYO1GB0I1T2 1018 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CLOCKO15516 846 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 HRO43593 1189 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 PRSS23O95084 383 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 LDLRP01130 860 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 HOXA6P31267 233 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SOX18P35713 384 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 GABRA4P48169 554 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SIM1P81133 766 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CFHR1Q03591 330 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 RPS26P11Q5JNZ5 115 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 PMS2CLQ68D20 193 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 PPP4R4Q6NUP7 873 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ARMC6Q6NXE6 501 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ERICH5Q6P6B1 374 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ZBTB49Q6ZSB9 765 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 C6orf120Q7Z4R8 191 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TSEN54Q7Z6J9 526 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 WDR5BQ86VZ2 330 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 OR4N5Q8IXE1 308 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SLC35F3Q8IY50 421 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 HS3ST5Q8IZT8 346 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 DNAJC22Q8N4W6 341 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CAMKVQ8NCB2 501 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SIMC1Q8NDZ2 872 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms