RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 BRF2Q9HAW0 419 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 MMP25Q9NPA2 562 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 NMRK1Q9NWW6 199 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 MS4A12Q9NXJ0 267 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 PLA2G3Q9NZ20 509 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 STMN3Q9NZ72 180 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 AHSPQ9NZD4 102 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 TEKT2Q9UIF3 430 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 PHF11Q9UIL8 331 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 TIMM22Q9Y584 194 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 CLDN16Q9Y5I7 305 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 A0A1W2PR48 441 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 DYTNA2CJ06 578 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 BLACEA4D250 179 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 CCDC151A5D8V7 595 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 GLOD5A6NK44 160 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 WASHC1A8K0Z3 465 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 J3QKU1 62 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 PROM1O43490 865 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 FGF17O60258 216 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ERLIN1O75477 346 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ENO1P06733 434 aaKnown RBP8.63□□□□□ -1.03
SNHG1-215ENST00000540904 NR2F6P10588 404 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 CHN1P15882 459 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ALDH3A1P30838 453 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 HTR6P50406 440 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 MAPK12P53778 367 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 FOXA1P55317 472 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 TAS2R50P59544 299 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 NAA20P61599 178 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ARG2P78540 354 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 SERTAD2Q14140 314 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 PCLAFQ15004 111 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ELAVL1Q15717 326 aaKnown RBP8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ACER2Q5QJU3 275 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 CCNYL2Q5T2Q4 361 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 MRM1Q6IN84 353 aaKnown RBP8.63□□□□□ -1.03
SNHG1-215ENST00000540904 SCIMPQ6UWF3 145 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 PAGE2Q7Z2X7 111 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 COMMD6Q7Z4G1 85 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 OR4N5Q8IXE1 308 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 METTL4Q8N3J2 472 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 SLC5A8Q8N695 610 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 Q8NA96 180 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 CATSPER1Q8NEC5 780 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 NFAM1Q8NET5 270 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-215ENST00000540904 TCP10LQ8TDR4 215 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ANKRD9Q96BM1 317 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ZIM3Q96PE6 472 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ACPTQ9BZG2 426 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ADAP2Q9NPF8 381 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 LYARQ9NX58 379 aaKnown RBP8.63□□□□□ -1.03
SNHG1-215ENST00000540904 SENP1Q9P0U3 644 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 VPS29Q9UBQ0 182 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ADAM29Q9UKF5 820 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 ASB4Q9Y574 426 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 CLCA3PQ9Y6N3 262 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 COL6A6A6NMZ7 2263 aa8.63□□□□□ -1.03
SNHG1-215ENST00000540904 SYNDIG1LA6NDD5 238 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 H3BQF6 201 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 MAN1A2O60476 641 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TRIM13O60858 407 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 SORBS2O94875 1100 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 AIFM1O95831 613 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 WDPCPO95876 746 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 HSD3B1P14060 373 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TNNI3P19429 210 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 HSD3B2P26439 372 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 HMGCS1Q01581 520 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 FOLH1Q04609 750 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 GALNT1Q10472 559 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TBL3Q12788 808 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 ASPHQ12797 758 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 CSTF3Q12996 717 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TLR1Q15399 786 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TERF2Q15554 542 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 IGFBP7Q16270 282 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 MEP1AQ16819 746 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 PRR30Q53SZ7 412 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 H3F3CQ6NXT2 135 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 Q6ZS92 163 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 CUZD1Q86UP6 607 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 CRLF3Q8IUI8 442 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 BEST3Q8N1M1 668 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TMEM132CQ8N3T6 1108 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 C1orf52Q8N6N3 182 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 GBP7Q8N8V2 638 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 B3GNT7Q8NFL0 401 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 ELP5Q8TE02 316 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 HAS2Q92819 552 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TANKQ92844 425 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 DAZLQ92904 295 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 UCN3Q969E3 161 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 ZNF354BQ96LW1 612 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 DGAT2Q96PD7 388 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 GATA5Q9BWX5 397 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 DEFB126Q9BYW3 111 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms