RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 HIST1H2AJQ99878 128 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 SMR3AQ99954 134 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 AIF1LQ9BQI0 150 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 CCDC77Q9BR77 488 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 H2AFJQ9BTM1 129 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 NT5DC2Q9H857 520 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 ACKR4Q9NPB9 350 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 PRTFDC1Q9NRG1 225 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 HOMER3Q9NSC5 361 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 SACM1LQ9NTJ5 587 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 SLC17A6Q9P2U8 582 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 DAPP1Q9UN19 280 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 NBEAL1Q6ZS30 2694 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 EML6Q6ZMW3 1958 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ARID1AO14497 2285 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 TRGV5A0A0B4J1U4 118 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 A0A0G2JN53 185 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ATP6AP2A0A1C7CYW4 349 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 A0A1W2PPR1 153 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 HSPB2A8KAH6 182 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ERI3O43414 337 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 CTNSO60931 367 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 CLEC3AO75596 197 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ATP6AP2O75787 350 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 SCELO95171 688 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ETHE1O95571 254 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 RAF1P04049 648 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 PGAM1P18669 254 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 GSTM2P28161 218 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 PIGAP37287 484 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 MAN2A2P49641 1150 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 LIM2P55344 173 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 STXBP1P61764 594 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 CKAP4Q07065 602 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 SLC13A2Q13183 592 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 SLC10A1Q14973 349 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 RBBP5Q15291 538 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 HSPB2Q16082 182 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 CYP1B1Q16678 543 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ACSF3Q4G176 576 aaPredicted RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 MSS51Q4VC12 460 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 PIGGQ5H8A4 983 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 WLSQ5T9L3 541 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 RNASEH2BQ5TBB1 312 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 ABHD17CQ6PCB6 329 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 OPN5Q6U736 354 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 HDXQ7Z353 690 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 WDR53Q7Z5U6 358 aaPredicted RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 UBE3DQ7Z6J8 389 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 CLNKQ7Z7G1 428 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 CXorf67Q86X51 503 aaPredicted RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 PRIMA1Q86XR5 153 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 IGDCC3Q8IVU1 814 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 FBXW8Q8N3Y1 598 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 FAM47BQ8NA70 645 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 TTLQ8NG68 377 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 OR2L5Q8NG80 312 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 NEIL3Q8TAT5 605 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 NUBPLQ8TB37 319 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 SLC2A12Q8TD20 617 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ZNF721Q8TF20 911 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 DAZLQ92904 295 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 C18orf12Q96KH6 178 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 WDR83Q9BRX9 315 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 ACBD3Q9H3P7 528 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ZNF446Q9NWS9 450 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 QPCTLQ9NXS2 382 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 JKAMPQ9P055 326 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 ACAD8Q9UKU7 415 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 CORO1CQ9ULV4 474 aaPredicted RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 SLC22A14Q9Y267 594 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 MAD1L1Q9Y6D9 718 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 KCNE2Q9Y6J6 123 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 SONP18583 2426 aaKnown RBP6.73□□□□□ -1.33
YBX3-209ENST00000540747 ARHGAP21Q5T5U3 1957 aa6.73□□□□□ -1.33
YBX3-209ENST00000540747 NCKAP5O14513 1909 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 CCDC151A5D8V7 595 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 CDC7O00311 574 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 CLDN4O14493 209 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 B3GALT2O43825 422 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 BANF1O75531 89 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 SEC31AO94979 1220 aaKnown RBP6.72□□□□□ -1.33
YBX3-209ENST00000540747 GOSR1O95249 250 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 WISP3O95389 354 aaPredicted RBP6.72□□□□□ -1.33
YBX3-209ENST00000540747 TTC4O95801 387 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 GUCA1CO95843 209 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 EPPINO95925 133 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 HEXAP06865 529 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 INHBBP09529 407 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 C1GALT1C1LP0DN25 315 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 EPXP11678 715 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 ZNF37AP17032 561 aaPredicted RBP6.72□□□□□ -1.33
YBX3-209ENST00000540747 CD53P19397 219 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 CD22P20273 847 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 CERS1P27544 350 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 UQCRC1P31930 480 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 TIMP3P35625 211 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 ZNF136P52737 540 aa6.72□□□□□ -1.33
YBX3-209ENST00000540747 DGKQP52824 942 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms