RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LIPGQ9Y5X9 500 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 SPACA6W5XKT8 324 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 MED13LQ71F56 2210 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM221AA4D161 298 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 HCN1O60741 890 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 LDB3O75112 727 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ZWINTO95229 277 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 COX7A2P14406 83 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 GABRA1P14867 456 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 CD22P20273 847 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ATP5A1P25705 553 aaKnown RBP11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 DNAJA1P31689 397 aaKnown RBP11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 PEX19P40855 299 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 CASP2P42575 452 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 MAN2A2P49641 1150 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 IGLV3-21P80748 117 aaPredicted RBP11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 DR1Q01658 176 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 PDIA2Q13087 525 aaKnown RBP11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 MYBPHQ13203 477 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 BIKQ13323 160 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 TMEM35AQ53FP2 167 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 WLSQ5T9L3 541 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 RTL6Q6ICC9 239 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ADNP2Q6IQ32 1131 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 UBE3DQ7Z6J8 389 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ANKMY2Q8IV38 441 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF321PQ8N8H1 164 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 PDPRQ8NCN5 879 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF721Q8TF20 911 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 NINJ1Q92982 152 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 UBE2E3Q969T4 207 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 F2RL3Q96RI0 385 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 MS4A8Q9BY19 250 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 PTBP2Q9UKA9 531 aaKnown RBP11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 ACAD8Q9UKU7 415 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 L3MBTL1Q9Y468 752 aa11.1□□□□□ -0.63
CBX3P4-202ENST00000540428 TRGV5A0A0B4J1U4 118 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 G3V3Y1 287 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 TP73O15350 636 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 DYRK3O43781 588 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF354AO60765 605 aaPredicted RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ETHE1O95571 254 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 IGKV3-11P04433 115 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 CCL3P10147 92 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 CD1DP15813 335 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 HIST1H1TP22492 207 aaPredicted RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 SERPINB1P30740 379 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 STT3AP46977 705 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 HSPA7P48741 367 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 DNASE1L1P49184 302 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 IRF8Q02556 426 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 FOLH1Q04609 750 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF791Q3KP31 576 aaPredicted RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 PIGGQ5H8A4 983 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 C1orf185Q5T7R7 199 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 RIPPLY2Q5TAB7 128 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC22A10Q63ZE4 541 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 CHSY3Q70JA7 882 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 LRRC70Q7Z2Q7 622 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 KLHL7Q8IXQ5 586 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 LAS2Q8IYD9 372 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 DND1Q8IYX4 353 aaKnown RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC15A4Q8N697 577 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ACOT4Q8N9L9 421 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 SNX31Q8N9S9 440 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC22A8Q8TCC7 542 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 PAQR8Q8TEZ7 354 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF473Q8WTR7 871 aaKnown RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ANKRD9Q96BM1 317 aaPredicted RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ART5Q96L15 291 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 FOXC2Q99958 501 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 MAPKAP1Q9BPZ7 522 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 CXXC4Q9H2H0 198 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 LDAHQ9H6V9 325 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 MS4A12Q9NXJ0 267 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 QPCTLQ9NXS2 382 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 TUBA8Q9NY65 449 aaPredicted RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 Q9UFV3 132 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 MTO1Q9Y2Z2 717 aaKnown RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 HCFC1P51610 2035 aa11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
CBX3P4-202ENST00000540428 ZFHX3Q15911 3703 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 MYOCOSA0A1B0GUC4 107 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 ATP6AP2A0A1C7CYW4 349 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 CCDC188H7C350 402 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 CCNT2O60583 730 aaKnown RBP11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 ATP6AP2O75787 350 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 CELA3AP09093 270 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 CCDC166P0CW27 439 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 STMN1P16949 149 aa11.08□□□□□ -0.64
CBX3P4-202ENST00000540428 EPORP19235 508 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms