RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TMEM38AQ9H6F2 299 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 HMG20AQ9NP66 347 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 CCNB1IP1Q9NPC3 277 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 TBCCD1Q9NVR7 557 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 MS4A12Q9NXJ0 267 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 TRBV4-1A0A0J9YWV2 114 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 CLCA1A8K7I4 914 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 AIREO43918 545 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 CBFA2T3O75081 653 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 SOX14O95416 240 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 ALPPL2P10696 532 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 DBTP11182 482 aaKnown RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 DRD3P35462 400 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 CTSKP43235 329 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 TAS2R38P59533 333 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 ST3GAL4Q11206 333 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 TP53BP2Q13625 1128 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 DUSP6Q16828 381 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 CRB2Q5IJ48 1285 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 KLHL17Q6TDP4 642 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 ADAMTSL4Q6UY14 1074 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 WDR53Q7Z5U6 358 aaPredicted RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 ADCK2Q7Z695 626 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 PDZD3Q86UT5 571 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 C17orf64Q86WR6 236 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 CLIP4Q8N3C7 705 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 OR6Q1Q8NGQ2 317 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 PHF10Q8WUB8 498 aaKnown RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 NLNQ9BYT8 704 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 SLIRPQ9GZT3 109 aaKnown RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 OR51E2Q9H255 320 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 DCSTAMPQ9H295 470 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 NMNAT1Q9HAN9 279 aaPredicted RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 C11orf16Q9NQ32 467 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 MBNL1Q9NR56 388 aaKnown RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 TEX10Q9NXF1 929 aaPredicted RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 THAP10Q9P2Z0 257 aaPredicted RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 MAPRE3Q9UPY8 281 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 POFUT2Q9Y2G5 429 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 WDR37Q9Y2I8 494 aa10.96□□□□□ -0.66
C11orf54-214ENST00000540113 FAM32AQ9Y421 112 aaKnown RBP10.96□□□□□ -0.66
C11orf54-214ENST00000540113 TRPM6Q9BX84 2022 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 DOCK8Q8NF50 2099 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 GLOD5A6NK44 160 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 TMPRSS11DO60235 418 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 TPST2O60704 377 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 SEMA7AO75326 666 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 CCNB2O95067 398 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PCDH8O95206 1070 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 CDK1P06493 297 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 ANXA8P13928 327 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 GJA4P35212 333 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 BSGP35613 385 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PIK3CBP42338 1070 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 CLCNKAP51800 687 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PCBP3P57721 371 aaKnown RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 FADDQ13158 208 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PDGFRLQ15198 375 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 ZNF630Q2M218 657 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 SPDYE7PQ495Y7 208 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 C9orf50Q5SZB4 431 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 UBE2UQ5VVX9 321 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 KHDRBS2Q5VWX1 349 aaKnown RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 LCTLQ6UWM7 567 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 UNC5DQ6UXZ4 953 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 STX19Q8N4C7 294 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 B3GNT7Q8NFL0 401 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 ZNF675Q8TD23 568 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 GEMIN6Q8WXD5 167 aaKnown RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 SLC38A4Q969I6 547 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 TMEM19Q96HH6 336 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 IL4I1Q96RQ9 567 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PLA2G2FQ9BZM2 168 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 OSGEPL1Q9H4B0 414 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 EPS8L2Q9H6S3 715 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 SFXN1Q9H9B4 322 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 LHX9Q9NQ69 397 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 IMPAD1Q9NX62 359 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 ANGPT4Q9Y264 503 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PLEKHM1Q9Y4G2 1056 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 CKAP5Q14008 2032 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 C1QTNF3-AMACRE9PGA6 284 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 OR1F1O43749 312 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 DPM1O60762 260 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 GABRB1P18505 474 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 UQCRC2P22695 453 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 KELP23276 732 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 RELAQ04206 551 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 RBBP4Q09028 425 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 SEC23BQ15437 767 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 PNCKQ6P2M8 343 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 DEF8Q6ZN54 512 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 CCDC80Q76M96 950 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 BCDIN3DQ7Z5W3 292 aaKnown RBP10.95□□□□□ -0.66
C11orf54-214ENST00000540113 EGFL6Q8IUX8 553 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 LACC1Q8IV20 430 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 TAGAPQ8N103 731 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms