RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 GPRC5BQ9NZH0 403 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 CTNNAL1Q9UBT7 734 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 COPS7AQ9UBW8 275 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 ST6GALNAC2Q9UJ37 374 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 EDARQ9UNE0 448 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 CHMP2BQ9UQN3 213 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 PPP2R2CQ9Y2T4 447 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 ATG4BQ9Y4P1 393 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 HIVEP2P31629 2446 aa7.51□□□□□ -1.21
CD4-209ENST00000539492 TRGV5A0A0B4J1U4 118 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 FAM95CA0A1B0GW59 222 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ATP6AP2A0A1C7CYW4 349 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ZNF354AO60765 605 aaPredicted RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 ATP6AP2O75787 350 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 FAM155BO75949 473 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 CELA3AP09093 270 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 COX7A2P14406 83 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 HOXB4P17483 251 aaPredicted RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 TNNI3P19429 210 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 KLK2P20151 261 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ENDOUP21128 410 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 DNASE1P24855 282 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ELK3P41970 407 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 GDF5P43026 501 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 KIR2DL3P43628 341 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 KCNC1P48547 511 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 TBL3Q12788 808 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 ZNF460Q14592 562 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 MORF4L2Q15014 288 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 TSNQ15631 228 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 CEBPEQ15744 281 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 MPEG1Q2M385 716 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 C18orf21Q32NC0 220 aaPredicted RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 VN1R5Q7Z5H4 357 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ZC3HC1Q86WB0 502 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 LIX1LQ8IVB5 337 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 PDIK1LQ8N165 341 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 TCAIMQ8N3R3 496 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ZNF321PQ8N8H1 164 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 SRFBP1Q8NEF9 429 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 NUBPLQ8TB37 319 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 SLC22A8Q8TCC7 542 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ACTRT1Q8TDG2 376 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 SREK1Q8WXA9 508 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 SLCO2A1Q92959 643 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 LRRC39Q96DD0 335 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 PTCD3Q96EY7 689 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 LRRC46Q96FV0 321 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 VPS39Q96JC1 886 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 KCNC2Q96PR1 638 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ALPK1Q96QP1 1244 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 GPATCH1Q9BRR8 931 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 WDR83Q9BRX9 315 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 EFCAB11Q9BUY7 163 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 ROGDIQ9GZN7 287 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 CLEC4MQ9H2X3 399 aaPredicted RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 ZNF703Q9H7S9 590 aaPredicted RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 CNOT10Q9H9A5 744 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 SH2D2AQ9NP31 389 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 RASSF1Q9NS23 344 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 RYDENQ9NUL5 291 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 DNAJC11Q9NVH1 559 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 WWOXQ9NZC7 414 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 SPRR3Q9UBC9 169 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 BOKQ9UMX3 212 aaPredicted RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 PCDHGB3Q9Y5G1 929 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 PSAT1Q9Y617 370 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.5□□□□□ -1.21
CD4-209ENST00000539492 SPACA6W5XKT8 324 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 USF3Q68DE3 2245 aa7.5□□□□□ -1.21
CD4-209ENST00000539492 PRR14LQ5THK1 2151 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 MYOCOSA0A1B0GUC4 107 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 NCF1BA6NI72 391 aaPredicted RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 A6NNC1 897 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 HSPB2A8KAH6 182 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 NCF1CA8MVU1 366 aaPredicted RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 SYT5O00445 386 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 CLGNO14967 610 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 LDB3O75112 727 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 ETHE1O95571 254 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 NCF1P14598 390 aaPredicted RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 ATP5A1P25705 553 aaKnown RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 PIGAP37287 484 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 ASCL1P50553 236 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 TAS2R39P59534 338 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 MGAT5Q09328 741 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 ILF2Q12905 390 aaKnown RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 FOXD4Q12950 439 aaPredicted RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 TGFBIQ15582 683 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 HSPB2Q16082 182 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 ZNF791Q3KP31 576 aaPredicted RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 FLYWCH1Q4VC44 716 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 PIGGQ5H8A4 983 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 PAGE2BQ5JRK9 111 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 CDKL4Q5MAI5 379 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 HP1BP3Q5SSJ5 553 aaPredicted RBP7.49□□□□□ -1.21
CD4-209ENST00000539492 SLC22A10Q63ZE4 541 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 ADNP2Q6IQ32 1131 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 ZNF793Q6ZN11 406 aa7.49□□□□□ -1.21
CD4-209ENST00000539492 CAMKMTQ7Z624 323 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms