RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 PRAMEF14Q5SWL7 426 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 PRAMEF13Q5VWM6 474 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 WASH2PQ6VEQ5 465 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 OR4D11Q8NGI4 311 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 NUS1Q96E22 293 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 DNAJC27Q9NZQ0 273 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 DKK3Q9UBP4 350 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 AP1M2Q9Y6Q5 423 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 NUMA1Q14980 2115 aa11.39□□□□□ -0.59
CPNE8-203ENST00000538596 PRRT4C9JH25 899 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TPST2O60704 377 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 KRT75O95678 551 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 C6P13671 934 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ACADLP28330 430 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SOX3P41225 446 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 PIK3CBP42338 1070 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 DGKGP49619 791 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 UGT2B15P54855 530 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 DHCR24Q15392 516 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 REEP3Q6NUK4 255 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SPATC1Q76KD6 591 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SLC9B2Q86UD5 537 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ATCAYQ86WG3 371 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 LACC1Q8IV20 430 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ANKRD53Q8N9V6 530 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 PLA2G15Q8NCC3 412 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ZFYVE19Q96K21 471 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ZNF717Q9BY31 904 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 NLNQ9BYT8 704 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 NXF2Q9GZY0 626 aaKnown RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 C14orf119Q9NWQ9 140 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ANKMY1Q9P2S6 941 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TAC3Q9UHF0 121 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 POU2F3Q9UKI9 436 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SH3BP5O60239 455 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 GPX5O75715 221 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 PAPLNO95428 1278 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 STATHP02808 62 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 PTX3P26022 381 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 S100A5P33763 92 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 MAGEA8P43361 318 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 MANFP55145 182 aaKnown RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 BCL7AQ4VC05 210 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 DEF8Q6ZN54 512 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 GRASPQ7Z6J2 395 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 COMTD1Q86VU5 262 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 FBXO15Q8NCQ5 510 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 KBTBD8Q8NFY9 601 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 APOBEC4Q8WW27 367 aaKnown RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 EXOSC8Q96B26 276 aaKnown RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SLC23A2Q9UGH3 650 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 LTBP2Q14767 1821 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 DOCK9Q9BZ29 2069 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TAF4O00268 1085 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 WWP2O00308 870 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 PPM1DO15297 605 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-203ENST00000538596 IFNA14P01570 189 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 CISD3P0C7P0 127 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 PTPN2P17706 415 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 UQCRC2P22695 453 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SLC6A11P48066 632 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TGM4P49221 684 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 FBXO43Q4G163 708 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 DESI1Q6ICB0 168 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TCTN3Q6NUS6 607 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SZRD1Q7Z422 152 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SPRED2Q7Z698 418 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 C11orf96Q7Z7L8 435 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 CACUL1Q86Y37 369 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 AMER3Q8N944 861 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 CNPPD1Q9BV87 410 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ANKHQ9HCJ1 492 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 ERVK13-1Q9NX77 482 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
CPNE8-203ENST00000538596 C5orf58C9J3I9 102 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 H3BN98 237 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 CYP17A1P05093 508 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 SRPRAP08240 638 aaKnown RBP11.37□□□□□ -0.59
CPNE8-203ENST00000538596 MAPK12P53778 367 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 COL9A2Q14055 689 aaPredicted RBP11.37□□□□□ -0.59
CPNE8-203ENST00000538596 EIF4HQ15056 248 aaKnown RBP11.37□□□□□ -0.59
CPNE8-203ENST00000538596 KCNJ8Q15842 424 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 ZNF181Q2M3W8 571 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 ARHGAP15Q53QZ3 475 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 PLAG1Q6DJT9 500 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 PAQR6Q6TCH4 344 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 FAM129CQ86XR2 697 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 NRSN1Q8IZ57 195 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 IQCF1Q8N6M8 205 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 TM4SF18Q96CE8 201 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 PDXPQ96GD0 296 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 CDCA4Q9BXL8 241 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 EXOSC4Q9NPD3 245 aaKnown RBP11.37□□□□□ -0.59
CPNE8-203ENST00000538596 CLN6Q9NWW5 311 aa11.37□□□□□ -0.59
CPNE8-203ENST00000538596 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms