RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 B4GALT2O60909 372 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 FUCA1P04066 466 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 LIPAP38571 399 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 REEP5Q00765 189 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 ZNF605Q86T29 641 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 FAM20CQ8IXL6 584 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 CENPSQ8N2Z9 138 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 AQP11Q8NBQ7 271 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 OR5P2Q8WZ92 322 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 LGALS12Q96DT0 336 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 TMEM19Q96HH6 336 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 C12orf66Q96MD2 445 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 PALMDQ9NP74 551 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 PMF1-BGLAPU3KQ54 211 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 KMOO15229 486 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 CCNB2O95067 398 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 LIMS1P48059 325 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 PXNP49023 591 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-204ENST00000538492 LIM2P55344 173 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 RUNX3Q13761 415 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 UBE2UQ5VVX9 321 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 COX4I2Q96KJ9 171 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 ALPK1Q96QP1 1244 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 RSPO3Q9BXY4 272 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-204ENST00000538492 ARMC7Q9H6L4 198 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 WDR26Q9H7D7 661 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 IMPAD1Q9NX62 359 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 WBP1LQ9NX94 342 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 CLCA1A8K7I4 914 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 NDUFS4O43181 175 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 CST6Q15828 149 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 SZRD1Q7Z422 152 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 C6orf120Q7Z4R8 191 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 ADCK1Q86TW2 530 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 TAGAPQ8N103 731 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 DYNC2LI1Q8TCX1 351 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 ITPAQ9BY32 194 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 IMP3Q9NV31 184 aaKnown RBP23.67■■□□□ 1.38
RAB40C-204ENST00000538492 ERGIC3Q9Y282 383 aa23.67■■□□□ 1.38
RAB40C-204ENST00000538492 A0A1W2PP55 124 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 FFAR1O14842 300 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 GASTP01350 101 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 HNRNPCP07910 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
RAB40C-204ENST00000538492 OCM2P0CE71 109 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 OCMP0CE72 109 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-204ENST00000538492 RHCEP18577 417 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 TP53BP2Q13625 1128 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 DGUOKQ16854 277 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 NUDT13Q86X67 352 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 INSM2Q96T92 566 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-204ENST00000538492 DUSP12Q9UNI6 340 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 KCNK6Q9Y257 313 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 STON1Q9Y6Q2 735 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 WASHC1A8K0Z3 465 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 HSD17B2P37059 387 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 PTGES3Q15185 160 aaKnown RBP23.66■■□□□ 1.38
RAB40C-204ENST00000538492 IRF4Q15306 451 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 MLF2Q15773 248 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-204ENST00000538492 WASH2PQ6VEQ5 465 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 UBE3DQ7Z6J8 389 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 MYDGFQ969H8 173 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 TMEM106CQ9BVX2 250 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 SIRT3Q9NTG7 399 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-204ENST00000538492 PLCXD1Q9NUJ7 323 aa23.66■■□□□ 1.38
RAB40C-204ENST00000538492 STSP08842 583 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 CTSKP43235 329 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 HMGA2P52926 109 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 ZNF846Q147U1 533 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 C7orf61Q8IZ16 206 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 HDDC3Q8N4P3 179 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 RGMAQ96B86 450 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 MACROD1Q9BQ69 325 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 TEX101Q9BY14 249 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 PCBD2Q9H0N5 130 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 HMG20AQ9NP66 347 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 CDK1P06493 297 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 GABRB1P18505 474 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 PCBP4P57723 403 aaKnown RBP23.65■■□□□ 1.38
RAB40C-204ENST00000538492 FGL2Q14314 439 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 RGS21Q2M5E4 152 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 SNX29P2Q8IUI4 249 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 C17orf62Q9BQA9 187 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 PLA2G2FQ9BZM2 168 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 NMNAT1Q9HAN9 279 aaPredicted RBP23.65■■□□□ 1.38
RAB40C-204ENST00000538492 NEUROD4Q9HD90 331 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 AKIP1Q9NQ31 210 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 TBCCD1Q9NVR7 557 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 PLEKHM1Q9Y4G2 1056 aa23.65■■□□□ 1.38
RAB40C-204ENST00000538492 TRBV4-1A0A0J9YWV2 114 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 EFCAB9A8MZ26 197 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 SCAMP1O15126 338 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 SULT1C4O75897 302 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 CBLP22681 906 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 POU1F1P28069 291 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 CSNK1G2P78368 415 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 KCNC4Q03721 635 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 KLHL17Q6TDP4 642 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 SLC30A8Q8IWU4 369 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 DEPDC4Q8N2C3 294 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 GPR32P1Q8NGA4 272 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms