RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	FITM2	Q8N6M3	262 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ENDOV	Q8N8Q3	282 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SNX31	Q8N9S9	440 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PPFIBP2	Q8ND30	876 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR52N2	Q8NGI0	321 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZFP28	Q8NHY6	868 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	RHEBL1	Q8TAI7	183 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	HMGCLL1	Q8TB92	370 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	LRRC8C	Q8TDW0	803 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ADAMTS14	Q8WXS8	1223 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TFAP2C	Q92754	450 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PTER	Q96BW5	349 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	FBXL8	Q96CD0	374 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ERP27	Q96DN0	273 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SPDL1	Q96EA4	605 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCDC126	Q96EE4	140 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	APOPT1	Q96IL0	206 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	IL17F	Q96PD4	163 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TGM7	Q96PF1	710 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CMKLR1	Q99788	373 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	HAUS8	Q9BT25	410 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MRI1	Q9BV20	369 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ACAT2	Q9BWD1	397 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PITPNM3	Q9BZ71	974 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	RAB33B	Q9H082	229 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ATG10	Q9H0Y0	220 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MYLK2	Q9H1R3	596 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MRPL46	Q9H2W6	279 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	FANCE	Q9HB96	536 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	IRAK4	Q9NWZ3	460 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	EURL	Q9NYK6	297 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	NUDT4	Q9NZJ9	180 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	STOX2	Q9P2F5	926 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	XPR1	Q9UBH6	696 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	OPTC	Q9UBM4	332 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	EPHA6	Q9UF33	1036 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TAC3	Q9UHF0	121 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MID2	Q9UJV3	735 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	IKZF3	Q9UKT9	509 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	POMT2	Q9UKY4	750 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	GRID1	Q9ULK0	1009 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	L3MBTL1	Q9Y468	752 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ANGPTL3	Q9Y5C1	460 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	KCNE2	Q9Y6J6	123 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MN1	Q10571	1320 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	GVINP1	Q7Z2Y8	2422 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266		A0A0J9YY10	115 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	FAM149A	A5PLN7	773 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	FOXO6	A8MYZ6	492 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266		E7ENX8	843 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	UBXN8	O00124	270 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	BTN3A3	O00478	584 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	AHCYL1	O43865	530 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCNT2	O60583	730 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	EDF1	O60869	148 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PEX11A	O75192	247 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	STK16	O75716	305 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZWINT	O95229	277 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZBTB11	O95625	1053 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	MT-CO3	P00414	261 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	C9	P02748	559 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ANKRD34C	P0C6C1	535 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	THRA	P10827	490 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	MYL2	P10916	166 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ERG	P11308	486 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	NEFH	P12036	1026 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PVR	P15151	417 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	MAG	P20916	626 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	FPR1	P21462	350 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	CALB2	P22676	271 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	HRH2	P25021	359 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PSMB5	P28074	263 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	EEF1D	P29692	281 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PRDX3	P30048	256 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCKBR	P32239	447 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PIK3CG	P48736	1102 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	HSPA7	P48741	367 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCR8	P51685	355 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PPP1CA	P62136	330 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ABAT	P80404	500 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	TAP2	Q03519	686 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	FOXM1	Q08050	763 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ASPH	Q12797	758 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	DLG1	Q12959	904 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	EIF3I	Q13347	325 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	TUBB3	Q13509	450 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PIN1	Q13526	163 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	FASTK	Q14296	549 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	GRB7	Q14451	532 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	RBBP5	Q15291	538 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PDK4	Q16654	411 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ISX	Q2M1V0	245 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	PTCHD3	Q3KNS1	767 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	TECRL	Q5HYJ1	363 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	CFAP157	Q5JU67	520 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	C1QL3	Q5VWW1	255 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	AP1AR	Q63HQ0	302 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	METTL2B	Q6P1Q9	378 aa	Known RBP	4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZYG11A	Q6WRX3	759 aa		4.11	□□□□□ -1.75
SNHG1-208	ENST00000538266	RAB11FIP2	Q7L804	512 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms