RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 COLEC12Q5KU26 742 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 USP43Q70EL4 1123 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 GTPBP3Q969Y2 492 aaKnown RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 MMP27Q9H306 513 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 NMNAT1Q9HAN9 279 aaPredicted RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 SLAMF7Q9NQ25 335 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 CUEDC1Q9NWM3 386 aaPredicted RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 GPR83Q9NYM4 423 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 ADAM29Q9UKF5 820 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 LINC01553A4QN01 128 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 C5orf67F2Z3F1 127 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 RTCAO00442 366 aaKnown RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 PCCBP05166 539 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 RPLP0P05388 317 aaKnown RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 BCHEP06276 602 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 ALOX5P09917 674 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 GADD45AP24522 165 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 FRKP42685 505 aaPredicted RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 CRISP1P54107 249 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 CDK3Q00526 305 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 FPGSQ05932 587 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 ST3GAL4Q11206 333 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 DUSP7Q16829 419 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 SPDYE7PQ495Y7 208 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 FAM78AQ5JUQ0 283 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 TMEM240Q5SV17 173 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 FAM46CQ5VWP2 391 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 TNFAIP8L2Q6P589 184 aaPredicted RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 NUDT13Q86X67 352 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 SLC38A5Q8WUX1 472 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 APOBEC4Q8WW27 367 aaKnown RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 RGMAQ96B86 450 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 TMEM19Q96HH6 336 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 DSN1Q9H410 356 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 CLN6Q9NWW5 311 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 CNOT2Q9NZN8 540 aaKnown RBP17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 TMCC3Q9ULS5 477 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 A3GALT2U3KPV4 340 aa17.04■□□□□ 0.32
PABPC1L-217ENST00000537323 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 KMOO15229 486 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 SH3BP5O60239 455 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 CNOT3O75175 753 aaKnown RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 ADAP00813 363 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 ADORA3P0DMS8 318 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 POU2F1P14859 743 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PORP16435 677 aaPredicted RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PCBP4P57723 403 aaKnown RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PUM1Q14671 1186 aaKnown RBP eCLIP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 NUMA1Q14980 2115 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PIP5KL1Q5T9C9 394 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 ZNF770Q6IQ21 691 aaPredicted RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 KLHL17Q6TDP4 642 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 ZNF367Q7RTV3 350 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 C6orf120Q7Z4R8 191 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 SLC44A2Q8IWA5 706 aaPredicted RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 KBTBD8Q8NFY9 601 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PHOSPHO2Q8TCD6 241 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 ZBED6CLQ96FA7 236 aaPredicted RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 DACH2Q96NX9 599 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PRSS16Q9NQE7 514 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 MS4A12Q9NXJ0 267 aa17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 PNMA8BQ9ULN7 279 aaPredicted RBP17.03■□□□□ 0.32
PABPC1L-217ENST00000537323 METTL15A6NJ78 407 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 BOLA2-SMG1P6H3BVE0 249 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 NDUFS4O43181 175 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 MFN2O95140 757 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 OXSR1O95747 527 aaPredicted RBP17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 GASTP01350 101 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 SLC35G4P0C7Q5 338 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 CHMP24386 653 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 TRA2BP62995 288 aaKnown RBP17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 PDGFRLQ15198 375 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 ZNF404Q494X3 552 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 RPS26P11Q5JNZ5 115 aaPredicted RBP17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 PERM1Q5SV97 790 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 FRMPD2BQ6IN97 320 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 SFTPA1Q8IWL2 248 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 B3GNT7Q8NFL0 401 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 RASSF5Q8WWW0 418 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 SMARCD2Q92925 531 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 ASB16Q96NS5 453 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 MENTQ9BUN1 341 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 SIRT3Q9NTG7 399 aaPredicted RBP17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 ACSS1Q9NUB1 689 aaPredicted RBP17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 PCDHGA4Q9Y5G9 962 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 NINQ8N4C6 2090 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 TRPM6Q9BX84 2022 aa17.02■□□□□ 0.32
PABPC1L-217ENST00000537323 TBC1D3BA6NDS4 549 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 CD40LGP29965 261 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 TGFBR1P36897 503 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 IL12RB1P42701 662 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 PPP5CP53041 499 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 LIM2P55344 173 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 RPS26P62854 115 aaKnown RBP17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 TOR1AIP1Q5JTV8 583 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 TUBA3EQ6PEY2 450 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 PTCHD4Q6ZW05 846 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 AMER2Q8N7J2 671 aa17.02■□□□□ 0.31
PABPC1L-217ENST00000537323 FAM46DQ8NEK8 389 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms