RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 POU6F2P78424 691 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 PMS2P3Q13401 168 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 EOGTQ5NDL2 527 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 NOXRED1Q6NXP6 359 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TMPPEQ6ZT21 453 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 CELF5Q8N6W0 485 aaKnown RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ZBTB8BQ8NAP8 495 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 OR8S1Q8NH09 359 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 OR8D2Q9GZM6 311 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 PIGVQ9NUD9 493 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TAS2R9Q9NYW1 312 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 PLD2O14939 933 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 PPM1BO75688 479 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 ADH6P28332 368 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 ENTPD1P49961 510 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 STC1P52823 247 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NFATC2Q13469 925 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SERINC3Q13530 473 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 GAS6Q14393 721 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 RABL3Q5HYI8 236 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NKAPLQ5M9Q1 402 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SLC39A4Q6P5W5 647 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 UGT2A3Q6UWM9 527 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SLC16A9Q7RTY1 509 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR4K14Q8NGD5 310 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR14K1Q8NGZ2 314 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR56A3Q8NH54 315 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NEIL3Q8TAT5 605 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 FANK1Q8TC84 345 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SCRN2Q96FV2 425 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM74Q96NL1 305 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF649Q9BS31 505 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 MROQ9BYG7 248 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 TBCCD1Q9NVR7 557 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SH3PXD2BA1X283 911 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 VEGFDO43915 354 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SSX5O60225 188 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CLDN7O95471 211 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 H2BFMP0C1H6 154 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CCND3P30281 292 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 DPP6P42658 865 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 ATP4BP51164 291 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 TBRG1Q3YBR2 411 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 COQ8AQ8NI60 647 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CD99L2Q8TCZ2 262 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 KIAA1143Q96AT1 154 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SUSD3Q96L08 255 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR2S2Q9NQN1 319 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SLC17A6Q9P2U8 582 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 GMEB2Q9UKD1 530 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CFAP20Q9Y6A4 193 aaKnown RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 A0A0G2JMP0 313 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 PRKACGP22612 351 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 DNASE1P24855 282 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 AGTR1P30556 359 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 RAB5BP61020 215 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 RNF130Q86XS8 419 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CLDN19Q8N6F1 224 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 C7orf57Q8NEG2 295 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR4M2Q8NGB6 313 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR9I1Q8NGQ6 314 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 SYT11Q9BT88 431 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NUFIP1Q9UHK0 495 aaKnown RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 HIF3AQ9Y2N7 669 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 LRRC37AA6NMS7 1700 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CXorf49A8MYA2 514 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NRP1O14786 923 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 DIRAS3O95661 229 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 IFNA4P05014 189 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 C8orf89P0DMQ9 161 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 GDF5P43026 501 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 MAP2K3P46734 347 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CD97P48960 835 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CLRN1P58418 232 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 KCNJ11Q14654 390 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 LRRC37A5PQ49AS3 106 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CARM1Q86X55 608 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 OR8K3Q8NH51 312 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 PROKR1Q8TCW9 393 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 GATAD2BQ8WXI9 593 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 KCNJ9Q92806 393 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 LRRC46Q96FV0 321 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF317Q96PQ6 595 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NSUN3Q9H649 340 aaKnown RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 REEP4Q9H6H4 257 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF701Q9NV72 531 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 NKX1-2Q9UD57 310 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-209ENST00000537178 CLEC4EQ9ULY5 219 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
CLIP1-209ENST00000537178 A0A1W2PPL8 197 aa10.23□□□□□ -0.77
CLIP1-209ENST00000537178 GRXCR1A8MXD5 290 aa10.23□□□□□ -0.77
CLIP1-209ENST00000537178 H3BSH0 61 aa10.23□□□□□ -0.77
CLIP1-209ENST00000537178 SOX30O94993 753 aa10.23□□□□□ -0.77
CLIP1-209ENST00000537178 CFL1P23528 166 aaKnown RBP10.23□□□□□ -0.77
CLIP1-209ENST00000537178 CRISP1P54107 249 aa10.23□□□□□ -0.77
CLIP1-209ENST00000537178 TMBIM6P55061 237 aa10.23□□□□□ -0.77
CLIP1-209ENST00000537178 SLC26A5P58743 744 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms