RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 EMC4Q5J8M3 183 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NDUFAF5Q5TEU4 345 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZNF793Q6ZN11 406 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GK5Q6ZS86 529 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 LRRC70Q7Z2Q7 622 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZNF321PQ8N8H1 164 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ACOT4Q8N9L9 421 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 C7orf57Q8NEG2 295 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 LILRB4Q8NHJ6 448 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SLC2A12Q8TD20 617 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZNF473Q8WTR7 871 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 UBE2E3Q969T4 207 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SCYL1Q96KG9 808 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM173AQ9BQD7 235 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 DPH5Q9H2P9 285 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 WHRNQ9P202 907 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NF1P21359 2839 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 A0A0G2JMM0 328 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 A0A1W2PPB8 328 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 A0A1W2PRS3 328 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM159BA6NKW6 160 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 KIR3DP1A8MWS1 328 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NPIPA2E9PIF3 369 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NPIPA3F8WFD2 350 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 G3V3Y1 287 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RTCAO00442 366 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SPRP35270 261 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CASP2P42575 452 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 E2F2Q14209 437 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 AP5B1Q2VPB7 878 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GXYLT1Q4G148 440 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MED27Q6P2C8 311 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OPN5Q6U736 354 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 C3orf62Q6ZUJ4 267 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ACAD11Q709F0 780 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CHSY3Q70JA7 882 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RPRMLQ8N4K4 120 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GOLM1Q8NBJ4 401 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 STAG3L4Q8TBR4 150 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SGCZQ96LD1 299 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ERP44Q9BS26 406 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PHACTR1Q9C0D0 580 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 KCNJ16Q9NPI9 418 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 COPS7AQ9UBW8 275 aa18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NKX2-6A6NCS4 301 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM187AA6NFU0 413 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM90A27PA6NNH2 459 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GLSO94925 669 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SCELO95171 688 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GSTA2P09210 222 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PCNAP12004 261 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 COX7A2P14406 83 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 HIST1H1TP22492 207 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CPN2P22792 545 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SERPINB1P30740 379 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ID2Q02363 134 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PMPCAQ10713 525 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GRTP1Q5TC63 336 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CDH24Q86UP0 819 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CTAGE3PQ8IX95 158 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 LAS2Q8IYD9 372 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OR5M3Q8NGP4 307 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ANKRD9Q96BM1 317 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 UCK2Q9BZX2 261 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ALG9Q9H6U8 611 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SACM1LQ9NTJ5 587 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NUDT4Q9NZJ9 180 aa18.22■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MAP1AP78559 2803 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OR14I1A6ND48 311 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FOXO6A8MYZ6 492 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 BCKDKO14874 412 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SH3BGRLO75368 114 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ETHE1O95571 254 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TGFB1P01137 390 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 P04436 131 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 IGFBP2P18065 325 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SSR2P43308 183 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NUP107P57740 925 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM47EQ6ZV65 393 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RAPH1Q70E73 1250 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ISCA2Q86U28 154 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CCDC71Q8IV32 467 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM109AQ8N4B1 249 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZNF721Q8TF20 911 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CMTM7Q96FZ5 175 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SMC6Q96SB8 1091 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 IL1RL2Q9HB29 575 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NMRAL1Q9HBL8 299 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PNPLA3Q9NST1 481 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OPTCQ9UBM4 332 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 AKAP6Q13023 2319 aa18.21■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SUPT3HB4E1H0 165 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SAP18O00422 153 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ZNF354AO60765 605 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SUPT3HO75486 399 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TOXO94900 526 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 IGHG3P01860 377 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 C1QAP02745 245 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms