RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 A8MVJ9 347 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 POC1B-GALNT4F8VUJ3 575 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 KLRC4-KLRK1H3BQV0 150 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PLPP1O14494 284 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 TFECO14948 347 aaPredicted RBP13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 FGF17O60258 216 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 KLK8O60259 260 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PRKRAO75569 313 aaKnown RBP13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 SCELO95171 688 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PTGER1P34995 402 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PIK3CBP42338 1070 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PIK3CGP48736 1102 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PHEXP78562 749 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PCBP2Q15366 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 TECRLQ5HYJ1 363 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 LIPJQ5W064 366 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 SP5Q6BEB4 398 aaPredicted RBP13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 IL20RBQ6UXL0 311 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 MNS1Q8NEH6 495 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 SLC2A12Q8TD20 617 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 SLC44A1Q8WWI5 657 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 ANKRD9Q96BM1 317 aaPredicted RBP13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 CDK15Q96Q40 435 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PAFAH2Q99487 392 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 TIMMDC1Q9NPL8 285 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 HPF1Q9NWY4 346 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 MYOTQ9UBF9 498 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 ADGRE2Q9UHX3 823 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF835Q9Y2P0 537 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 RNF11Q9Y3C5 154 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 PCDHGA11Q9Y5H2 935 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 MYO7BQ6PIF6 2116 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 CCDC189A1A4V9 331 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 HS6ST1O60243 411 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 CDC40O60508 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 OR6B1O95007 311 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 ETHE1O95571 254 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 CTAGE8P0CG41 777 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 COX7A2P14406 83 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 GRNP28799 593 aaKnown RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 SOX3P41225 446 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 NEK2P51955 445 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 HK2P52789 917 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 C18orf63Q68DL7 685 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 RPTNQ6XPR3 784 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 C3P1Q6ZMU1 363 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 Q6ZPB1 254 aaPredicted RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 TAOK1Q7L7X3 1001 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 GPR180Q86V85 440 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 RELL1Q8IUW5 271 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 CTAGE4Q8IX94 777 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 ZNF808Q8N4W9 903 aaPredicted RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 POGLUT1Q8NBL1 392 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 PSD4Q8NDX1 1056 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 DOK4Q8TEW6 326 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 ATP6V1E2Q96A05 226 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 PPWD1Q96BP3 646 aaKnown RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 REPS1Q96D71 796 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 MTFMTQ96DP5 389 aaKnown RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 RASL10BQ96S79 203 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 TSPYL1Q9H0U9 437 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 RPF2Q9H7B2 306 aaKnown RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 NOL11Q9H8H0 719 aaKnown RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 COPS7AQ9UBW8 275 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 ENTPD4Q9Y227 616 aa13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.29
RTN3P1-201ENST00000536295 G3V3Y1 287 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 H0YIV9 168 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 EEDO75530 441 aaKnown RBP13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 TUBB4AP04350 444 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 RBP1P09455 135 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 PTX3P26022 381 aaPredicted RBP13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 ECHS1P30084 290 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 TLX1P31314 330 aaPredicted RBP13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 HNRNPH2P55795 449 aaKnown RBP13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 RNF4P78317 190 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 ADORA2A-AS1P86434 159 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 TNFRSF17Q02223 184 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 FOLH1Q04609 750 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 NOTCH2Q04721 2471 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 ART3Q13508 389 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 ZNF750Q32MQ0 723 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 FGD2Q7Z6J4 655 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 SLC34A3Q8N130 599 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 AGAP11Q8TF27 550 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 TEX15Q9BXT5 2789 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 FUT8Q9BYC5 575 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 DEPPQ9NTK1 212 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 MS4A12Q9NXJ0 267 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 PHF11Q9UIL8 331 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 MEMO1Q9Y316 297 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 ATG4BQ9Y4P1 393 aa13.26□□□□□ -0.29
RTN3P1-201ENST00000536295 A0A1B0GTH9 108 aa13.25□□□□□ -0.29
RTN3P1-201ENST00000536295 GLOD5A6NK44 160 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms