RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 HNRNPA0Q13151 305 aaKnown RBP6.74□□□□□ -1.33
CTNND1-236ENST00000533667 TUBB3Q13509 450 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 MPP2Q14168 576 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CCL14Q16627 93 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 TMEM35AQ53FP2 167 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CDKL4Q5MAI5 379 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 KANK2Q63ZY3 851 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 KCT2Q8NC54 265 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.74□□□□□ -1.335e-8■■■■□ 23.2
CTNND1-236ENST00000533667 THEM6Q8WUY1 208 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 GLYATL1Q969I3 302 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 ARMC5Q96C12 935 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 RHBDF1Q96CC6 855 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CMKLR1Q99788 373 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 ORAI3Q9BRQ5 295 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 MVB12BQ9H7P6 319 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CD93Q9NPY3 652 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 PAK1IP1Q9NWT1 392 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-236ENST00000533667 AP1M2Q9Y6Q5 423 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 TCHHQ07283 1943 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 OR5K4A6NMS3 321 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 BOLA2-SMG1P6H3BVE0 249 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 KCNJ13O60928 360 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 DIRAS1O95057 198 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 SOX14O95416 240 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 BMP2P12643 396 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 GJA1P17302 382 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 MYF6P23409 242 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CFL1P23528 166 aaKnown RBP6.74□□□□□ -1.33
CTNND1-236ENST00000533667 EIF2S3P41091 472 aaKnown RBP6.74□□□□□ -1.33
CTNND1-236ENST00000533667 SOX9P48436 509 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 KCNC1P48547 511 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 ENTPD1P49961 510 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 GPR143P51810 404 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CRISP1P54107 249 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 ACTA2P62736 377 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 ACTG2P63267 376 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 CRHR2Q13324 411 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 OLIG2Q13516 323 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 LRP8Q14114 963 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 SGCBQ16585 318 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 PPP1R3AQ16821 1122 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 FAM214AQ32MH5 1076 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 MPP7Q5T2T1 576 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 RAB12Q6IQ22 244 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 SNX29P2Q8IUI4 249 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 PRSS58Q8IYP2 241 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 ZNF565Q8N9K5 539 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 DENND6BQ8NEG7 585 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 OR2L2Q8NH16 312 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 C11orf49Q9H6J7 331 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 PTGES2Q9H7Z7 377 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 MCCC2Q9HCC0 563 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 SMURF1Q9HCE7 757 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 BIN3Q9NQY0 253 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 WASF3Q9UPY6 502 aa6.74□□□□□ -1.33
CTNND1-236ENST00000533667 PEAK1Q9H792 1746 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 VSTM5A8MXK1 200 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 TSPAN6O43657 245 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 MAFKO60675 156 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 TGM6O95932 706 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 CH25HO95992 272 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 PDYNP01213 254 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 PFKLP17858 780 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 AGTR2P50052 363 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 CTBP2P56545 445 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 RAB4BP61018 213 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 CLDN10P78369 228 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 TLE2Q04725 743 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 PPP1R8Q12972 351 aaKnown RBP6.73□□□□□ -1.33
CTNND1-236ENST00000533667 TMEM164Q5U3C3 297 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 LRRC69Q6ZNQ3 347 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 C14orf80Q86SX3 495 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 SIAH1Q8IUQ4 282 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 ZNF440Q8IYI8 595 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 NEIL3Q8TAT5 605 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 STOML3Q8TAV4 291 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 SCLYQ96I15 445 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 TMEM184CQ9NVA4 438 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 HPF1Q9NWY4 346 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 ADAMTS6Q9UKP5 1117 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 DLG5Q8TDM6 1919 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 ROBO1Q9Y6N7 1651 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 UNC119BA6NIH7 251 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 C12orf71A8MTZ7 269 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 B4DGG1 531 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 M0R233 179 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 RP2O75695 350 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 GGT1P19440 569 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 S1PR1P21453 382 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 VAMP1P23763 118 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 ELK4P28324 431 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 MAGEA12P43365 314 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 ZNF41P51814 821 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-236ENST00000533667 RAB8AP61006 207 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 NPRL3Q12980 569 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 CEACAM7Q14002 265 aa6.73□□□□□ -1.33
CTNND1-236ENST00000533667 STK11Q15831 433 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms