RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ALOXE3Q9BYJ1 711 aa9.19□□□□□ -0.94
NUP98-220ENST00000533346 ILKAPQ9H0C8 392 aaPredicted RBP9.19□□□□□ -0.94
NUP98-220ENST00000533346 GSTO2Q9H4Y5 243 aa9.19□□□□□ -0.94
NUP98-220ENST00000533346 RPF2Q9H7B2 306 aaKnown RBP9.19□□□□□ -0.94
NUP98-220ENST00000533346 OXSMQ9NWU1 459 aa9.19□□□□□ -0.94
NUP98-220ENST00000533346 NMRK1Q9NWW6 199 aa9.19□□□□□ -0.94
NUP98-220ENST00000533346 MID2Q9UJV3 735 aa9.19□□□□□ -0.94
NUP98-220ENST00000533346 COPG1Q9Y678 874 aaKnown RBP9.19□□□□□ -0.94
NUP98-220ENST00000533346 GOLGA8RI6L899 631 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 TMPRSS11DO60235 418 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 VPS4BO75351 444 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 OR4F21O95013 312 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 CBX6O95503 412 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 KRT6AP02538 564 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 KRT6BP04259 564 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 FAM58BPP0C7Q3 252 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 KRT4P19013 534 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 TPP2P29144 1249 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 TLX1P31314 330 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 GSTM5P46439 218 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 STT3AP46977 705 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 KRT6CP48668 564 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 NEK2P51955 445 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 RAP1GDS1P52306 607 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 HNRNPH2P55795 449 aaKnown RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
NUP98-220ENST00000533346 GALNT1Q10472 559 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 TBL3Q12788 808 aaKnown RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 CSTF3Q12996 717 aaKnown RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 TUBA3CQ13748 450 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 IGFBP7Q16270 282 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 SPRED3Q2MJR0 410 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ERCC6LQ2NKX8 1250 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 TNFAIP8L3Q5GJ75 292 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 GALNT18Q6P9A2 607 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 TUBA3EQ6PEY2 450 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 PAGE2Q7Z2X7 111 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 MYLK4Q86YV6 388 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 GPALPP1Q8IXQ4 340 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ST13P4Q8IZP2 240 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 RNF175Q8N4F7 328 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 GBP7Q8N8V2 638 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 BANPQ8N9N5 519 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 FAM47BQ8NA70 645 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ST6GALNAC3Q8NDV1 305 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 CATSPER1Q8NEC5 780 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 OR1N1Q8NGS0 311 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 EPS8L3Q8TE67 593 aaKnown RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 AGAP11Q8TF27 550 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 FAR1Q8WVX9 515 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 SELENOMQ8WWX9 145 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 METTL2AQ96IZ6 378 aaKnown RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 TRIM4Q9C037 500 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ELOVL6Q9H5J4 265 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 AGPAT4Q9NRZ5 378 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ASF1BQ9NVP2 202 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ABI3Q9P2A4 366 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ZNF223Q9UK11 482 aaPredicted RBP9.18□□□□□ -0.94
NUP98-220ENST00000533346 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 PLAAQ9Y263 795 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 NTNG1Q9Y2I2 539 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 PLLPQ9Y342 182 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 ATG4BQ9Y4P1 393 aa9.18□□□□□ -0.94
NUP98-220ENST00000533346 A0A1W2PR48 441 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 CCDC151A5D8V7 595 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 ASPDHA6ND91 283 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 TMEM200CA6NKL6 621 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 TCP11X1B4DZS4 312 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 COPEO14579 308 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 FGF17O60258 216 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 PRAMEF2O60811 474 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 GUCY1B2O75343 617 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 ULK1O75385 1050 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 EEDO75530 441 aaKnown RBP9.17□□□□□ -0.94
NUP98-220ENST00000533346 NEURL1O76050 574 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 ZFAND5O76080 213 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 MYO1DO94832 1006 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 GPR75O95800 540 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 DDAH2O95865 285 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 PDYNP01213 254 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 IGKV3-11P04433 115 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 MYL2P10916 166 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 EDN3P14138 238 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 CPA3P15088 417 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 PRPH2P23942 346 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 CD96P40200 585 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 SLCO1A2P46721 670 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 STX4Q12846 297 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 DDX39BQ13838 428 aaKnown RBP9.17□□□□□ -0.94
NUP98-220ENST00000533346 TTC19Q6DKK2 380 aaPredicted RBP9.17□□□□□ -0.94
NUP98-220ENST00000533346 CYP20A1Q6UW02 462 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 GPRIN3Q6ZVF9 776 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 BEST3Q8N1M1 668 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 CISD2Q8N5K1 135 aaKnown RBP9.17□□□□□ -0.94
NUP98-220ENST00000533346 HORMAD2Q8N7B1 307 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 AMER2Q8N7J2 671 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 SUN3Q8TAQ9 357 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 ZNF721Q8TF20 911 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms