RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 NTMT1Q9BV86 223 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 MRPL46Q9H2W6 279 aaKnown RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 RPF2Q9H7B2 306 aaKnown RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 TRIM45Q9H8W5 580 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 PHF11Q9UIL8 331 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 YARS2Q9Y2Z4 477 aaKnown RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 DOPEY1Q5JWR5 2465 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 C17orf105B2RV13 164 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 FOXE1O00358 373 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-204ENST00000532550 PLPP1O14494 284 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 OR7A17O14581 309 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 RIPK2O43353 540 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 ITGA10O75578 1167 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 COX7A2P14406 83 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 CUL3Q13618 768 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 KRTCAP3Q53RY4 240 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 TEX35Q5T0J7 233 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 TTC19Q6DKK2 380 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-204ENST00000532550 ADGRD1Q6QNK2 874 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 CYP20A1Q6UW02 462 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 HSDL2Q6YN16 418 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 TIFABQ6ZNK6 161 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 MILR1Q7Z6M3 343 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 FJX1Q86VR8 437 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 OR4N5Q8IXE1 308 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 ZCCHC7Q8N3Z6 543 aaKnown RBP16.05■□□□□ 0.16
PHRF1-204ENST00000532550 OR52B6Q8NGF0 335 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 WDR20Q8TBZ3 569 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 TANKQ92844 425 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 ANKRD9Q96BM1 317 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-204ENST00000532550 RBM18Q96H35 190 aaKnown RBP16.05■□□□□ 0.16
PHRF1-204ENST00000532550 OR8D2Q9GZM6 311 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 ZNF223Q9UK11 482 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-204ENST00000532550 PCTPQ9UKL6 214 aa16.05■□□□□ 0.16
PHRF1-204ENST00000532550 IQANK1A0A1B0GTG1 560 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 ASPDHA6ND91 283 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 NME2P1O60361 137 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 NME2P22392 152 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 BUD31P41223 144 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-204ENST00000532550 SSR4P51571 173 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 ID2Q02363 134 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.04■□□□□ 0.161e-17■□□□□ 9.6
PHRF1-204ENST00000532550 C1QL3Q5VWW1 255 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 DGAT2Q96PD7 388 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 SERPINI1Q99574 410 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 DDX31Q9H8H2 851 aaKnown RBP16.04■□□□□ 0.16
PHRF1-204ENST00000532550 SEMA4BQ9NPR2 832 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-204ENST00000532550 LYARQ9NX58 379 aaKnown RBP16.04■□□□□ 0.16
PHRF1-204ENST00000532550 ATG4BQ9Y4P1 393 aa16.04■□□□□ 0.16
PHRF1-204ENST00000532550 TRGV8A0A0C4DH27 118 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 NPIPA5E9PKD4 350 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 KLRC4-KLRK1H3BQV0 150 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 PROM1O43490 865 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 DYRK3O43781 588 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 FAM153BP0C7A2 387 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 TAC1P20366 129 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 GCAP28676 217 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 BSGP35613 385 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 TNFRSF17Q02223 184 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 IFT88Q13099 833 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 SLC29A2Q14542 456 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 FAM153CQ494X1 144 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 FRG2Q64ET8 278 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 MAMDC2Q7Z304 686 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-204ENST00000532550 ZNF227Q86WZ6 799 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 CNPY4Q8N129 248 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 CYP4Z2PQ8N1L4 340 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 OR5L2Q8NGL0 311 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 RELTQ969Z4 430 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 FRMD6Q96NE9 622 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 NSUN5Q96P11 429 aaKnown RBP16.03■□□□□ 0.16
PHRF1-204ENST00000532550 FRG2BQ96QU4 278 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 LIN28AQ9H9Z2 209 aaKnown RBP16.03■□□□□ 0.16
PHRF1-204ENST00000532550 WDR41Q9HAD4 459 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 ZBTB26Q9HCK0 441 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 AHSPQ9NZD4 102 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 MYOTQ9UBF9 498 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 COPS7AQ9UBW8 275 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 PPT2Q9UMR5 302 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 NPIPA1Q9UND3 350 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 ERVK-11Q9UQG0 969 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 KLF13Q9Y2Y9 288 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-204ENST00000532550 GTF3C1Q12789 2109 aa16.03■□□□□ 0.16
PHRF1-204ENST00000532550 FGF17O60258 216 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 PRKNO60260 465 aaPredicted RBP16.02■□□□□ 0.16
PHRF1-204ENST00000532550 EEDO75530 441 aaKnown RBP16.02■□□□□ 0.16
PHRF1-204ENST00000532550 OR2J2O76002 312 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 ETHE1O95571 254 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 OTCP00480 354 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 FAM58BPP0C7Q3 252 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 STT3AP46977 705 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 CASP6P55212 293 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.16
PHRF1-204ENST00000532550 FOLH1Q04609 750 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 C10orf62Q5T681 223 aaPredicted RBP16.02■□□□□ 0.16
PHRF1-204ENST00000532550 LCA5Q86VQ0 697 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 NUDT13Q86X67 352 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 TMEM151AQ8N4L1 468 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms