RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZNF295-AS1Q8N0V1 137 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 ZNF321PQ8N8H1 164 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 C7orf57Q8NEG2 295 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 OR2M7Q8NG81 312 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 OR52N2Q8NGI0 321 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 SLC2A12Q8TD20 617 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 ANKRD9Q96BM1 317 aaPredicted RBP15.61■□□□□ 0.09
CPSF1-207ENST00000531727 CMTM7Q96FZ5 175 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 LURAP1Q96LR2 239 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 COQ3Q9NZJ6 369 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 HRH3Q9Y5N1 445 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 DCHS2Q6V1P9 2916 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 PINLYPA6NC86 204 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 SAP18O00422 153 aaKnown RBP15.6■□□□□ 0.09
CPSF1-207ENST00000531727 SH3BGRLO75368 114 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 PDE9AO76083 593 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 EPB42P16452 691 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 CPN2P22792 545 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 CASQ1P31415 396 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 PPIAP62937 165 aaKnown RBP15.6■□□□□ 0.09
CPSF1-207ENST00000531727 RNF4P78317 190 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 TRADDQ15628 312 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 DEPDC1Q5TB30 811 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 RTL4Q6ZR62 310 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 OR5L2Q8NGL0 311 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 CA5BP1Q8WTZ4 195 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 SREK1Q8WXA9 508 aaKnown RBP15.6■□□□□ 0.09
CPSF1-207ENST00000531727 SDCCAG3Q96C92 435 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 NXNL1Q96CM4 212 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 DEFB127Q9H1M4 99 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 COPS7AQ9UBW8 275 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 ADGRE2Q9UHX3 823 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 ACOT9Q9Y305 439 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 OTOGQ6ZRI0 2925 aa15.6■□□□□ 0.09
CPSF1-207ENST00000531727 CSMD2Q7Z408 3487 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 PCNX1Q96RV3 2341 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 A0A0G2JMM0 328 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 A0A1W2PPB8 328 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 A0A1W2PRS3 328 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 KIR3DP1A8MWS1 328 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ACOT7O00154 380 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 FGF17O60258 216 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ETHE1O95571 254 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 MTHFD2P13995 350 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 SSTR2P30874 369 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 IGLV3-21P80748 117 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-207ENST00000531727 PLGLB1Q02325 96 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ID2Q02363 134 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 GUCY2DQ02846 1103 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ZNF750Q32MQ0 723 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 TMEM211Q6ICI0 200 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 OR4C11Q6IEV9 310 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 PAOXQ6QHF9 649 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 OPN5Q6U736 354 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 RGS9BPQ6ZS82 235 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 CCDC91Q7Z6B0 441 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 CENPLQ8N0S6 344 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-207ENST00000531727 MARVELD2Q8N4S9 558 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 GOLM1Q8NBJ4 401 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 HUS1BQ8NHY5 278 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 RHEBL1Q8TAI7 183 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ZNF721Q8TF20 911 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 SCYL1Q96KG9 808 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 SPOCK3Q9BQ16 436 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 TTTY12Q9BZ98 90 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ENKD1Q9H0I2 346 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 OR51B5Q9H339 312 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 TP63Q9H3D4 680 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-207ENST00000531727 ZDHHC11Q9H8X9 412 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 AKAP9Q99996 3911 aa15.59■□□□□ 0.09
CPSF1-207ENST00000531727 CACNA1CQ13936 2221 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 A0A087X1B8 175 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 CCDC189A1A4V9 331 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 SYCE1LA8MT33 242 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 FAM166BA8MTA8 275 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 ZNF354AO60765 605 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-207ENST00000531727 COX7A2P14406 83 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 CNR1P21554 472 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 PIK3CBP42338 1070 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 STT3AP46977 705 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 NR0B1P51843 470 aaKnown RBP15.58■□□□□ 0.08
CPSF1-207ENST00000531727 RAP1GDS1P52306 607 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 IRF9Q00978 393 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 SLAMF1Q13291 335 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 DDX39BQ13838 428 aaKnown RBP15.58■□□□□ 0.08
CPSF1-207ENST00000531727 SETDB1Q15047 1291 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 GK5Q6ZS86 529 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 SLC22A16Q86VW1 577 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 RNF175Q8N4F7 328 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 TEX9Q8N6V9 391 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 ACBD4Q8NC06 268 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 KCTD4Q8WVF5 259 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 RGMAQ96B86 450 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 SGCZQ96LD1 299 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 DGAT2Q96PD7 388 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 FAM173AQ9BQD7 235 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 SORBS1Q9BX66 1292 aaKnown RBP15.58■□□□□ 0.08
CPSF1-207ENST00000531727 RPF2Q9H7B2 306 aaKnown RBP15.58■□□□□ 0.08
CPSF1-207ENST00000531727 DMRT3Q9NQL9 472 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms